| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is invG [H]
Identifier: 85060069
GI number: 85060069
Start: 3596667
End: 3598307
Strand: Reverse
Name: invG [H]
Synonym: SG2091
Alternate gene names: 85060069
Gene position: 3598307-3596667 (Counterclockwise)
Preceding gene: 85060070
Following gene: 85060068
Centisome position: 86.27
GC content: 59.66
Gene sequence:
>1641_bases ATGAATAACATCGCTCTGATAGGCCGCGGCTTGCTCTGCGTTATGTTACTGGCCTGCACCGGCCTTCTTGCAGGCGCGCG GGCGGCGGAGTTACCCCGACAAGGCGACGGCTATGTGGCAAACAAAGACGGCGTTAAAGTGTTTTTCGACGCGCTTTCGG CGCGCCTCAACCAGCCGGTCATTGTCAGCAAGCTGGCGGCGCGTAAGCAAATTAGCGGCGAATTCGATTTGGCTGATCCG CGAGCGCTGCTGGCGCGCATTACCCAGCAGATGGGGATGATGTGGTACAGCGACGGCCAGGCTATTTATATCTATGACGC CAGTGAAACGCGTCACGCGGTGGTGGCGCTGCGTACGATCTTGCCGGCGGCGCTGCGTCATTTTTTGCAGCAGGCCCAGC TGCATGACCCGCGCTATCCGCTGCGGGGGGATCCCGGCGGACGACTCCTTTATCTTTCAGGCCCGCCGATGTATGTCGAA CTGGTGGAAAACGCAGCCCGCCTGCTGGATAAGGAACCGGATGGAATACACGATCGCGAGCAGGCCGAGGTTATCCCGCT AAGCTACACCTTTGTCGGCGATCGTTATTATGCCTTGCGCGGCGAAAAGGTGACCATTCCCGGTATCGCCACGGTGATAG AGCGGCTGATGAGGCGGGAAGGGCGATCGGCGGTGGCTGACGTTCCTGCCCCGCTGACGCCGGCTGAGGCCCTGTTGCCT GTAGCGGAGGTGCGCGCGGAACAGGATGTGGAACCGCTGCCGCTGTGGCCTGTACAGGTGATTGCCAATCCCAGCAATAA CAGCCTGCTGGTCAAGGGTACCGGCCGCCAGGTCCAATTCGTGCGCAATCTGGTGCGTTCACTGGATATACCGAAGCGCC ACGTGGAGTTATCGTTATGGATAATTGATTTGGAAAAGAGCGATCTTGATCAATTCGGCATCAATTGGCAGGGCGGCGCC CGCATTGGCCAGCGCGGGGGCGTCACGCTCAATCAGGGATCCTATAGCGCGCTGGACGGTACGCGGTTTGTCGCCTCCAT ATTGGCGCTGGCGCGGAAACACCGCGCCAACATTGTCTCGCGGCCGATTATCCTGACCCAGGAAAATGTGCCGGCGATTT TCGATAACAACAGGACCTTTTATACTCGGCTTCTGGGAGAACGCAGCGTGGAGCTGCGCGAAGTGACCTACGGTACCATG ATAAGCGTCCTGCCGCGGTTTTCCGGCGACGATCAAATTGAGATGGTGTTGACCATCGAAGACGGCGGCGAGGTCTCCCG GCGGCAGAGTAATCCCGGCTCTGACGACCTGCCGGAAGTGGGCCGGACCCATATCAGTACGGTCGCGCGCGTGCCGCGGG GAAAAAGCCTGCTGATTGGCGGCTACACCCGCGATGAGCTCAGGGGTAACCGCGCCCGGTTACCCGGTCTCGGGTCGATA CCGCTGATTGGCGGGCTGTTTCGCCACCGCATCGATAAACAGGCCAATATGGTCAGGGTTTTTCTCATCCAGCCGCGGGA AATTTCTGAGCCGCTGCAGCAAGACGCCGCCGCGTTTGCCCGTTCAATTACTGCTACTGCGCGCAGCCATGAAGGCACAC TGAAGGACTGGGCCGATAATTATCTTGCCAGCCAGCACTGA
Upstream 100 bases:
>100_bases ATGGCTATGCCTCGTCCTCGCACCTCTCCAACGATGTCAGGGACGCCTTTGGGGTTTCCCCCCGCGGGATATGGAATATG ATCAACAAGAAAGCGGAACA
Downstream 100 bases:
>100_bases CCGGCAAAATAATGCTCTGATTGCTGGATCACGCTACGATGAAAATTCTTATTAGCTGAGAATATGGGCGCTGGTTTACC CGGCGGTGAGTAAATGTGGT
Product: type III secretion apparatus InvG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MNNIALIGRGLLCVMLLACTGLLAGARAAELPRQGDGYVANKDGVKVFFDALSARLNQPVIVSKLAARKQISGEFDLADP RALLARITQQMGMMWYSDGQAIYIYDASETRHAVVALRTILPAALRHFLQQAQLHDPRYPLRGDPGGRLLYLSGPPMYVE LVENAARLLDKEPDGIHDREQAEVIPLSYTFVGDRYYALRGEKVTIPGIATVIERLMRREGRSAVADVPAPLTPAEALLP VAEVRAEQDVEPLPLWPVQVIANPSNNSLLVKGTGRQVQFVRNLVRSLDIPKRHVELSLWIIDLEKSDLDQFGINWQGGA RIGQRGGVTLNQGSYSALDGTRFVASILALARKHRANIVSRPIILTQENVPAIFDNNRTFYTRLLGERSVELREVTYGTM ISVLPRFSGDDQIEMVLTIEDGGEVSRRQSNPGSDDLPEVGRTHISTVARVPRGKSLLIGGYTRDELRGNRARLPGLGSI PLIGGLFRHRIDKQANMVRVFLIQPREISEPLQQDAAAFARSITATARSHEGTLKDWADNYLASQH
Sequences:
>Translated_546_residues MNNIALIGRGLLCVMLLACTGLLAGARAAELPRQGDGYVANKDGVKVFFDALSARLNQPVIVSKLAARKQISGEFDLADP RALLARITQQMGMMWYSDGQAIYIYDASETRHAVVALRTILPAALRHFLQQAQLHDPRYPLRGDPGGRLLYLSGPPMYVE LVENAARLLDKEPDGIHDREQAEVIPLSYTFVGDRYYALRGEKVTIPGIATVIERLMRREGRSAVADVPAPLTPAEALLP VAEVRAEQDVEPLPLWPVQVIANPSNNSLLVKGTGRQVQFVRNLVRSLDIPKRHVELSLWIIDLEKSDLDQFGINWQGGA RIGQRGGVTLNQGSYSALDGTRFVASILALARKHRANIVSRPIILTQENVPAIFDNNRTFYTRLLGERSVELREVTYGTM ISVLPRFSGDDQIEMVLTIEDGGEVSRRQSNPGSDDLPEVGRTHISTVARVPRGKSLLIGGYTRDELRGNRARLPGLGSI PLIGGLFRHRIDKQANMVRVFLIQPREISEPLQQDAAAFARSITATARSHEGTLKDWADNYLASQH >Mature_546_residues MNNIALIGRGLLCVMLLACTGLLAGARAAELPRQGDGYVANKDGVKVFFDALSARLNQPVIVSKLAARKQISGEFDLADP RALLARITQQMGMMWYSDGQAIYIYDASETRHAVVALRTILPAALRHFLQQAQLHDPRYPLRGDPGGRLLYLSGPPMYVE LVENAARLLDKEPDGIHDREQAEVIPLSYTFVGDRYYALRGEKVTIPGIATVIERLMRREGRSAVADVPAPLTPAEALLP VAEVRAEQDVEPLPLWPVQVIANPSNNSLLVKGTGRQVQFVRNLVRSLDIPKRHVELSLWIIDLEKSDLDQFGINWQGGA RIGQRGGVTLNQGSYSALDGTRFVASILALARKHRANIVSRPIILTQENVPAIFDNNRTFYTRLLGERSVELREVTYGTM ISVLPRFSGDDQIEMVLTIEDGGEVSRRQSNPGSDDLPEVGRTHISTVARVPRGKSLLIGGYTRDELRGNRARLPGLGSI PLIGGLFRHRIDKQANMVRVFLIQPREISEPLQQDAAAFARSITATARSHEGTLKDWADNYLASQH
Specific function: Involved in the invasion of the cells of the intestinal epithelium. Could be necessary for the export of invasion related determinants [H]
COG id: COG1450
COG function: function code NU; Type II secretory pathway, component PulD
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP D family [H]
Homologues:
Organism=Escherichia coli, GI1789793, Length=266, Percent_Identity=26.3157894736842, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005644 - InterPro: IPR004846 - InterPro: IPR004845 - InterPro: IPR003522 [H]
Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]
EC number: NA
Molecular weight: Translated: 60327; Mature: 60327
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00875 T2SP_D
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIALIGRGLLCVMLLACTGLLAGARAAELPRQGDGYVANKDGVKVFFDALSARLNQPV CCCEEEEHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCCH IVSKLAARKQISGEFDLADPRALLARITQQMGMMWYSDGQAIYIYDASETRHAVVALRTI HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEECCCEEEEEECCCCHHHHHHHHHH LPAALRHFLQQAQLHDPRYPLRGDPGGRLLYLSGPPMYVELVENAARLLDKEPDGIHDRE HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC QAEVIPLSYTFVGDRYYALRGEKVTIPGIATVIERLMRREGRSAVADVPAPLTPAEALLP CCEEEEEEEEEECCEEEEEECCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH VAEVRAEQDVEPLPLWPVQVIANPSNNSLLVKGTGRQVQFVRNLVRSLDIPKRHVELSLW HHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEE IIDLEKSDLDQFGINWQGGARIGQRGGVTLNQGSYSALDGTRFVASILALARKHRANIVS EEECCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RPIILTQENVPAIFDNNRTFYTRLLGERSVELREVTYGTMISVLPRFSGDDQIEMVLTIE CCEEEECCCCCEEEECCCEEEEEHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEC DGGEVSRRQSNPGSDDLPEVGRTHISTVARVPRGKSLLIGGYTRDELRGNRARLPGLGSI CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCCCCCCC PLIGGLFRHRIDKQANMVRVFLIQPREISEPLQQDAAAFARSITATARSHEGTLKDWADN HHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH YLASQH HHCCCC >Mature Secondary Structure MNNIALIGRGLLCVMLLACTGLLAGARAAELPRQGDGYVANKDGVKVFFDALSARLNQPV CCCEEEEHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCCH IVSKLAARKQISGEFDLADPRALLARITQQMGMMWYSDGQAIYIYDASETRHAVVALRTI HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEECCCEEEEEECCCCHHHHHHHHHH LPAALRHFLQQAQLHDPRYPLRGDPGGRLLYLSGPPMYVELVENAARLLDKEPDGIHDRE HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC QAEVIPLSYTFVGDRYYALRGEKVTIPGIATVIERLMRREGRSAVADVPAPLTPAEALLP CCEEEEEEEEEECCEEEEEECCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH VAEVRAEQDVEPLPLWPVQVIANPSNNSLLVKGTGRQVQFVRNLVRSLDIPKRHVELSLW HHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEE IIDLEKSDLDQFGINWQGGARIGQRGGVTLNQGSYSALDGTRFVASILALARKHRANIVS EEECCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RPIILTQENVPAIFDNNRTFYTRLLGERSVELREVTYGTMISVLPRFSGDDQIEMVLTIE CCEEEECCCCCEEEECCCEEEEEHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEC DGGEVSRRQSNPGSDDLPEVGRTHISTVARVPRGKSLLIGGYTRDELRGNRARLPGLGSI CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCCCCCCC PLIGGLFRHRIDKQANMVRVFLIQPREISEPLQQDAAAFARSITATARSHEGTLKDWADN HHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH YLASQH HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7868245; 7997169; 11677609 [H]