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The map label for this gene is flhD [H]

Identifier: 85060046

GI number: 85060046

Start: 3571689

End: 3572039

Strand: Reverse

Name: flhD [H]

Synonym: SG2068

Alternate gene names: 85060046

Gene position: 3572039-3571689 (Counterclockwise)

Preceding gene: 85060047

Following gene: 85060045

Centisome position: 85.64

GC content: 38.75

Gene sequence:

>351_bases
ATGAATACCAGTGAAGTGCTGAAGAATATCTACGGTATCAATCTGTCTTATTTATCATTAGCGCAACGTTTGATTCAAAC
AGATAAATCTTCTGCGATGTTTCGATTGGGTATTAGTGAATCCATGGCGGAAACATTGCAGAAATTAACCATGGCGCAAA
TGGTAAAACTGGCAGAAACGAATCAGCTGATTTGCGTGTTTCGTTTTGAAGATCCGAAAGCCATTACACAGCTTACACAG
GATTCACGGGTGGAAGATCTTAATCAAATACATGCCAGTATTTTATTGTCCAGTCGATTAAATGAGCAATTAACCACGAA
AGCTGGCTCAACGCCTAAAAGAAAGAGTTAA

Upstream 100 bases:

>100_bases
CACAATTTGGCCAATATCCTGTTCTAATAACCATAGCTTCCTAATTACAGGAGATTATGATGACCCGACTACACCTGAAC
ATAGTCATTAGGGATGTAAA

Downstream 100 bases:

>100_bases
ACATGGCCGAAAAAAGTATTGTCCAAGAGGTAAAAGAAATCCAGCTTGCAATGGAGTTGATTTCTCTTGGCGCACGGTTG
CAGATGCTGGAAAGTGAAAC

Product: transcriptional activator FlhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MNTSEVLKNIYGINLSYLSLAQRLIQTDKSSAMFRLGISESMAETLQKLTMAQMVKLAETNQLICVFRFEDPKAITQLTQ
DSRVEDLNQIHASILLSSRLNEQLTTKAGSTPKRKS

Sequences:

>Translated_116_residues
MNTSEVLKNIYGINLSYLSLAQRLIQTDKSSAMFRLGISESMAETLQKLTMAQMVKLAETNQLICVFRFEDPKAITQLTQ
DSRVEDLNQIHASILLSSRLNEQLTTKAGSTPKRKS
>Mature_116_residues
MNTSEVLKNIYGINLSYLSLAQRLIQTDKSSAMFRLGISESMAETLQKLTMAQMVKLAETNQLICVFRFEDPKAITQLTQ
DSRVEDLNQIHASILLSSRLNEQLTTKAGSTPKRKS

Specific function: Transcriptional activator. Involved in the regulation of a number of genetic systems. Together with FlhC it acts as an activator of class 2 flagellar genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FlhD family [H]

Homologues:

Organism=Escherichia coli, GI145693151, Length=100, Percent_Identity=72, Blast_Score=147, Evalue=2e-37,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007911
- ProDom:   PD015582 [H]

Pfam domain/function: PF05247 FlhD [H]

EC number: NA

Molecular weight: Translated: 13036; Mature: 13036

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSEVLKNIYGINLSYLSLAQRLIQTDKSSAMFRLGISESMAETLQKLTMAQMVKLAET
CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCC
NQLICVFRFEDPKAITQLTQDSRVEDLNQIHASILLSSRLNEQLTTKAGSTPKRKS
CCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNTSEVLKNIYGINLSYLSLAQRLIQTDKSSAMFRLGISESMAETLQKLTMAQMVKLAET
CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCC
NQLICVFRFEDPKAITQLTQDSRVEDLNQIHASILLSSRLNEQLTTKAGSTPKRKS
CCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA