| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059947
Identifier: 85059947
GI number: 85059947
Start: 3394637
End: 3395077
Strand: Reverse
Name: 85059947
Synonym: SG1969
Alternate gene names: NA
Gene position: 3395077-3394637 (Counterclockwise)
Preceding gene: 85059950
Following gene: 85059944
Centisome position: 81.39
GC content: 48.3
Gene sequence:
>441_bases ATGGGTCAAGTTGCGTTCGATACATTGAAATTCGTTGAAACACTAGAAACTGCTGGCTTGCCTAAAGATCAGGCTAAGGC AATTTCGCTTGCAGTTCGTGAATCGCACGAGGCAGTTGATGTTGCTACCAAGCGCGATCTTGACGATGCCAAAAAAGACG TTTTATCTGAAGTTACAGCCGTCAAGCGTGACCTTGAGGACGTGCATAAAGAAATCGACGCCCGCTTCGAGAAGACCGAC GCTCAGATGCAAGCCCGCTTCGAGAAGACCGACGCGCAGATAGCCGATGTCCGTAAGGACCTATCAGCAGAGATAGCCGA TGTTCGCAAGGATATTGCTAACAGGTTCGATAAATTGGGACTACAGATGACGGTTCGTGTTGGTGGGATGCTTATTGCTG CCGTTGGCCTTATGACCGCTATTTTGAAATTGCTGAAATAG
Upstream 100 bases:
>100_bases CACCTGAATTTGCAGATGCAGATTGACTATAGCGCATGAGTTGATCTTCCGTCAATAAGATTGCTGGGTTACACTTGCTC AAAAGAGGAGGATCCCTCAT
Downstream 100 bases:
>100_bases CTTCAGTCATACACCCGCGTTAACTTGCGTACCTGCTTCTTGAGTCGCTTATTTTCCTCCATCAGATAGGGAATGGTTGA TTTATATACCATTGTCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MGQVAFDTLKFVETLETAGLPKDQAKAISLAVRESHEAVDVATKRDLDDAKKDVLSEVTAVKRDLEDVHKEIDARFEKTD AQMQARFEKTDAQIADVRKDLSAEIADVRKDIANRFDKLGLQMTVRVGGMLIAAVGLMTAILKLLK
Sequences:
>Translated_146_residues MGQVAFDTLKFVETLETAGLPKDQAKAISLAVRESHEAVDVATKRDLDDAKKDVLSEVTAVKRDLEDVHKEIDARFEKTD AQMQARFEKTDAQIADVRKDLSAEIADVRKDIANRFDKLGLQMTVRVGGMLIAAVGLMTAILKLLK >Mature_145_residues GQVAFDTLKFVETLETAGLPKDQAKAISLAVRESHEAVDVATKRDLDDAKKDVLSEVTAVKRDLEDVHKEIDARFEKTDA QMQARFEKTDAQIADVRKDLSAEIADVRKDIANRFDKLGLQMTVRVGGMLIAAVGLMTAILKLLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16140; Mature: 16009
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQVAFDTLKFVETLETAGLPKDQAKAISLAVRESHEAVDVATKRDLDDAKKDVLSEVTA CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VKRDLEDVHKEIDARFEKTDAQMQARFEKTDAQIADVRKDLSAEIADVRKDIANRFDKLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LQMTVRVGGMLIAAVGLMTAILKLLK HHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GQVAFDTLKFVETLETAGLPKDQAKAISLAVRESHEAVDVATKRDLDDAKKDVLSEVTA CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VKRDLEDVHKEIDARFEKTDAQMQARFEKTDAQIADVRKDLSAEIADVRKDIANRFDKLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LQMTVRVGGMLIAAVGLMTAILKLLK HHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA