Definition Sodalis glossinidius str. 'morsitans', complete genome.
Accession NC_007712
Length 4,171,146

Click here to switch to the map view.

The map label for this gene is ymfN [C]

Identifier: 85059944

GI number: 85059944

Start: 3389133

End: 3389564

Strand: Reverse

Name: ymfN [C]

Synonym: SG1966

Alternate gene names: 85059944

Gene position: 3389564-3389133 (Counterclockwise)

Preceding gene: 85059947

Following gene: 85059943

Centisome position: 81.26

GC content: 46.3

Gene sequence:

>432_bases
ATGAGTATGTCATTGATAGCTAAGGCTATGAATATCAAAGTCGGTAACCCGATACGTAAACTGGTTCTCCTTAAGCTGGC
TGATAATGCCAATGACAAAGGGGAGTGCTGGCCTTCGTATCAGCATATTGCCGATCATTGTGAATGCAGTAAAAGCACAG
TTCGAGATCACATTGATGCACTGGAAAAAGCGGGTTTGTTGGTAAAAGAAAATCGTACCGGCACAAATAATGGTAAAGGT
AATACATTCAACGTTTACCATCTGAAATTGGATAACCCTATGCCGACTCCCAGCACACCCCCTATGCCGACAGGCGGCAC
CAGAATTAGTCACTCTTTTGAACCAGTTATGGAACCTAAAACCCCTTACCCCCTACCGGGGGCCTCTCCCCGGAACCGGC
AGGAAAAAACCAAACCCCCAACCAAAACCTGA

Upstream 100 bases:

>100_bases
ACTGCCCGCCGGTTTATCCCGGCGGCTTAGAGGACATCGCCCGTCGCATCGGTAAGCGTCTGGTAGAAGAGTTTCGCAAG
TTGAAGGAGAAGTTAGAAAA

Downstream 100 bases:

>100_bases
CCAGCTTTCCACGCAGGACTATCAGGTAGCACTGGCAATCTACAACGACACGGTAGCCGACAGACTCCCCCACGCTGTAG
AGCTTAACGACAAGCGGCGC

Product: putative phage replication protein

Products: NA

Alternate protein names: Phage Replication Protein; Replication Protein Phage; Transcriptional Regulator; Bacteriophage Replication Protein; Replication Of DNA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDALEKAGLLVKENRTGTNNGKG
NTFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPKTPYPLPGASPRNRQEKTKPPTKT

Sequences:

>Translated_143_residues
MSMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDALEKAGLLVKENRTGTNNGKG
NTFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPKTPYPLPGASPRNRQEKTKPPTKT
>Mature_142_residues
SMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDALEKAGLLVKENRTGTNNGKGN
TFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPKTPYPLPGASPRNRQEKTKPPTKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15759; Mature: 15628

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDA
CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
LEKAGLLVKENRTGTNNGKGNTFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPK
HHHCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPYPLPGASPRNRQEKTKPPTKT
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDA
CHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
LEKAGLLVKENRTGTNNGKGNTFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPK
HHHCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPYPLPGASPRNRQEKTKPPTKT
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA