| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is ymfN [C]
Identifier: 85059944
GI number: 85059944
Start: 3389133
End: 3389564
Strand: Reverse
Name: ymfN [C]
Synonym: SG1966
Alternate gene names: 85059944
Gene position: 3389564-3389133 (Counterclockwise)
Preceding gene: 85059947
Following gene: 85059943
Centisome position: 81.26
GC content: 46.3
Gene sequence:
>432_bases ATGAGTATGTCATTGATAGCTAAGGCTATGAATATCAAAGTCGGTAACCCGATACGTAAACTGGTTCTCCTTAAGCTGGC TGATAATGCCAATGACAAAGGGGAGTGCTGGCCTTCGTATCAGCATATTGCCGATCATTGTGAATGCAGTAAAAGCACAG TTCGAGATCACATTGATGCACTGGAAAAAGCGGGTTTGTTGGTAAAAGAAAATCGTACCGGCACAAATAATGGTAAAGGT AATACATTCAACGTTTACCATCTGAAATTGGATAACCCTATGCCGACTCCCAGCACACCCCCTATGCCGACAGGCGGCAC CAGAATTAGTCACTCTTTTGAACCAGTTATGGAACCTAAAACCCCTTACCCCCTACCGGGGGCCTCTCCCCGGAACCGGC AGGAAAAAACCAAACCCCCAACCAAAACCTGA
Upstream 100 bases:
>100_bases ACTGCCCGCCGGTTTATCCCGGCGGCTTAGAGGACATCGCCCGTCGCATCGGTAAGCGTCTGGTAGAAGAGTTTCGCAAG TTGAAGGAGAAGTTAGAAAA
Downstream 100 bases:
>100_bases CCAGCTTTCCACGCAGGACTATCAGGTAGCACTGGCAATCTACAACGACACGGTAGCCGACAGACTCCCCCACGCTGTAG AGCTTAACGACAAGCGGCGC
Product: putative phage replication protein
Products: NA
Alternate protein names: Phage Replication Protein; Replication Protein Phage; Transcriptional Regulator; Bacteriophage Replication Protein; Replication Of DNA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDALEKAGLLVKENRTGTNNGKG NTFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPKTPYPLPGASPRNRQEKTKPPTKT
Sequences:
>Translated_143_residues MSMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDALEKAGLLVKENRTGTNNGKG NTFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPKTPYPLPGASPRNRQEKTKPPTKT >Mature_142_residues SMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDALEKAGLLVKENRTGTNNGKGN TFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPKTPYPLPGASPRNRQEKTKPPTKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15759; Mature: 15628
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDA CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH LEKAGLLVKENRTGTNNGKGNTFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPK HHHCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPYPLPGASPRNRQEKTKPPTKT CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDA CHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH LEKAGLLVKENRTGTNNGKGNTFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPK HHHCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPYPLPGASPRNRQEKTKPPTKT CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA