| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059839
Identifier: 85059839
GI number: 85059839
Start: 3185707
End: 3186216
Strand: Reverse
Name: 85059839
Synonym: SG1861
Alternate gene names: NA
Gene position: 3186216-3185707 (Counterclockwise)
Preceding gene: 85059840
Following gene: 85059838
Centisome position: 76.39
GC content: 57.25
Gene sequence:
>510_bases TTGAACAGCAGGCCGCCCAATAAAAGTGGGTTAACCGATACCCGCAGCCGTTACCATCAGGCACTGGGGGTATGCAACCA GCTCGCCAGCACCGGCGCGGCCATGGCGGTCACCGGCGGCGCCACACTGCTGGGCATGAAACCGGCGTTAAGCGAAGCGG CGGCCTATAGCCAGCATGTGCAGTGTTTCAGGGCGCAGGGAGTCAGTGAGCTGCAAGTACGAAATGCAAAGGACTTTGTC GCCAGCCATCCTGTGCTGGGCAACAGTCAAACGGAATTAATGAAGTTATACACGGAATCATGGGCCATCACCCGCGACCC GCACCACACTCAGGATGCCACCGTGCAGCTTGCCCGCGCAGAAACCGCTATCAAGATGCTGGGCAATCAAGGTTTGCTTA CCCCTGAGCAGACCGAAAGTTTCAATCAGCTGTCTTACGCCATGCTGAAGAACGCCGAGCTGCGCAACGAGATCCGAAAC GGCTCGCCAGCTTTATCAATGAATCGGTGA
Upstream 100 bases:
>100_bases ACAAAGCGGCATCGCCACCCGTCAACAGCTGACGCCCAGCGTGCCTTAAAATTCCGCACCGCCGAGGCCAATATCCATCT GGCTACCCAGCAGCAACGCC
Downstream 100 bases:
>100_bases AGGCGTTTGCTGTCACACAAACCATGGTGACGCCGAAGGATACCAATGATTTTATGAAGCGCGGCGGCTCAGCAACCAAG GATATCGACAGAAGCGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MNSRPPNKSGLTDTRSRYHQALGVCNQLASTGAAMAVTGGATLLGMKPALSEAAAYSQHVQCFRAQGVSELQVRNAKDFV ASHPVLGNSQTELMKLYTESWAITRDPHHTQDATVQLARAETAIKMLGNQGLLTPEQTESFNQLSYAMLKNAELRNEIRN GSPALSMNR
Sequences:
>Translated_169_residues MNSRPPNKSGLTDTRSRYHQALGVCNQLASTGAAMAVTGGATLLGMKPALSEAAAYSQHVQCFRAQGVSELQVRNAKDFV ASHPVLGNSQTELMKLYTESWAITRDPHHTQDATVQLARAETAIKMLGNQGLLTPEQTESFNQLSYAMLKNAELRNEIRN GSPALSMNR >Mature_169_residues MNSRPPNKSGLTDTRSRYHQALGVCNQLASTGAAMAVTGGATLLGMKPALSEAAAYSQHVQCFRAQGVSELQVRNAKDFV ASHPVLGNSQTELMKLYTESWAITRDPHHTQDATVQLARAETAIKMLGNQGLLTPEQTESFNQLSYAMLKNAELRNEIRN GSPALSMNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18358; Mature: 18358
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRPPNKSGLTDTRSRYHQALGVCNQLASTGAAMAVTGGATLLGMKPALSEAAAYSQHV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCHHHHHHHHHHHHH QCFRAQGVSELQVRNAKDFVASHPVLGNSQTELMKLYTESWAITRDPHHTQDATVQLARA HHHHHCCCHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ETAIKMLGNQGLLTPEQTESFNQLSYAMLKNAELRNEIRNGSPALSMNR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNSRPPNKSGLTDTRSRYHQALGVCNQLASTGAAMAVTGGATLLGMKPALSEAAAYSQHV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCHHHHHHHHHHHHH QCFRAQGVSELQVRNAKDFVASHPVLGNSQTELMKLYTESWAITRDPHHTQDATVQLARA HHHHHCCCHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ETAIKMLGNQGLLTPEQTESFNQLSYAMLKNAELRNEIRNGSPALSMNR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA