| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059840
Identifier: 85059840
GI number: 85059840
Start: 3187707
End: 3188303
Strand: Reverse
Name: 85059840
Synonym: SG1862
Alternate gene names: NA
Gene position: 3188303-3187707 (Counterclockwise)
Preceding gene: 85059841
Following gene: 85059839
Centisome position: 76.44
GC content: 61.14
Gene sequence:
>597_bases GTGGATGATGGCGTTATCGAGGTGAAAGCCTATGCCGATACGCTGATGAAAGCCCATCTCAATCATGCCGATCCGCATCC ACAGTATGCGCCCAAGGCCAGCCCGGTTTTCACCGGCACACCGATTGCACCGACGGCCAAAACCTTTCCGCTCAATACGC CGGTATTGCTGACCGACGTGCTGGACGCCAGCGGCAAGGCTGGCAATAAAGGGACACTGGCCCGCGCGCTGGATGCTATC GCCGCCCAGGCTAAACCGGTCACTGTGGTAGTGTGTGTTCCCCAGGGCAAGACCGAAGCGGAAACCACCACCCATATCAT CGGCGGCGTCACCGCCGAGGGCAAAAAAACCGGTATCAAGGCGCTCTTGGCCGCACAGGGCCAGCTCGGCGTCAAGCCGC GTATTCTCGGTGTGCTGGGGCATGATACCCAGGCGGTCGCTGCCGAGTTGCTGGCCGCCGCACAGCGCCTGCGCGCCAAA ATCGATGAGCAGACCGGCGCTGGCATAAAACCCTGTCCAATGTCGGCGTTAATGGCGTCACCGGCATCAGCGCGGATGTG TTCTGGGATCTGCAGGACACAGGCACTGACCTGCTGA
Upstream 100 bases:
>100_bases CGGGCGCACCCAGACCATTCGCATGATCCTGATCGTCAACAGCACCGAGGAACTGGCGCTGAAGATTGACCCGTCCATCG TGCTGGCGACGTGGCACTAT
Downstream 100 bases:
>100_bases ACCAGAACGCCGTCACCACGCTCATCCGCAAGGACGGCTACCGTTTTTGGGGCTCGCGCACCTGCTAGGATGATCTACTG TTCCAGTTTGAAAGTGCCAC
Product: putative phage major tail sheath protein
Products: NA
Alternate protein names: Phage Tail Sheath Protein; Phage Tail Sheath Protein; Phage-Related Tail Sheath Protein; Bacteriophage Tail Sheath Protein; Phage-Related Tail Fibre Protein-Like Protein; Phage-Related Tail Protein; Bacteriophage P2 Tail Sheath Protein GPFI; Phage TAIL SHEATH PROTEIN; Phage Tail Sheath-Like Protein; Bacteriophage Tail Sheath Protein FI; Prophage Tail Sheath; Phage P2 Tail Sheath FI-Like Protein; Bacteriophage P2 Tail Sheath Protein
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MDDGVIEVKAYADTLMKAHLNHADPHPQYAPKASPVFTGTPIAPTAKTFPLNTPVLLTDVLDASGKAGNKGTLARALDAI AAQAKPVTVVVCVPQGKTEAETTTHIIGGVTAEGKKTGIKALLAAQGQLGVKPRILGVLGHDTQAVAAELLAAAQRLRAK IDEQTGAGIKPCPMSALMASPASARMCSGICRTQALTC
Sequences:
>Translated_198_residues MDDGVIEVKAYADTLMKAHLNHADPHPQYAPKASPVFTGTPIAPTAKTFPLNTPVLLTDVLDASGKAGNKGTLARALDAI AAQAKPVTVVVCVPQGKTEAETTTHIIGGVTAEGKKTGIKALLAAQGQLGVKPRILGVLGHDTQAVAAELLAAAQRLRAK IDEQTGAGIKPCPMSALMASPASARMCSGICRTQALTC >Mature_198_residues MDDGVIEVKAYADTLMKAHLNHADPHPQYAPKASPVFTGTPIAPTAKTFPLNTPVLLTDVLDASGKAGNKGTLARALDAI AAQAKPVTVVVCVPQGKTEAETTTHIIGGVTAEGKKTGIKALLAAQGQLGVKPRILGVLGHDTQAVAAELLAAAQRLRAK IDEQTGAGIKPCPMSALMASPASARMCSGICRTQALTC
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20280; Mature: 20280
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDGVIEVKAYADTLMKAHLNHADPHPQYAPKASPVFTGTPIAPTAKTFPLNTPVLLTDV CCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH LDASGKAGNKGTLARALDAIAAQAKPVTVVVCVPQGKTEAETTTHIIGGVTAEGKKTGIK HHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHH ALLAAQGQLGVKPRILGVLGHDTQAVAAELLAAAQRLRAKIDEQTGAGIKPCPMSALMAS HHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCC PASARMCSGICRTQALTC CHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDDGVIEVKAYADTLMKAHLNHADPHPQYAPKASPVFTGTPIAPTAKTFPLNTPVLLTDV CCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH LDASGKAGNKGTLARALDAIAAQAKPVTVVVCVPQGKTEAETTTHIIGGVTAEGKKTGIK HHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHH ALLAAQGQLGVKPRILGVLGHDTQAVAAELLAAAQRLRAKIDEQTGAGIKPCPMSALMAS HHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCC PASARMCSGICRTQALTC CHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA