Definition Sodalis glossinidius str. 'morsitans', complete genome.
Accession NC_007712
Length 4,171,146

Click here to switch to the map view.

The map label for this gene is 85059790

Identifier: 85059790

GI number: 85059790

Start: 3082632

End: 3083030

Strand: Reverse

Name: 85059790

Synonym: SG1812

Alternate gene names: NA

Gene position: 3083030-3082632 (Counterclockwise)

Preceding gene: 85059791

Following gene: 85059789

Centisome position: 73.91

GC content: 53.63

Gene sequence:

>399_bases
ATGCCAAATCTTGATGTAACAGACGTCCTGTTTGATCCCGACTTCTGTGATACTCATCTAGTGGTCACTCGCCGGTTTCA
GCAGACGGATGCAGATGGCATCACGACCAGTGCGGAAGAACACTCTGGCTTTTCGGGTGTGGTGACGGTTGATCGCTCAC
TGGAAAACCGCCGAATGCAGGCCGGCCAGGTGATCAGCGGCGCCATATTGGTGGTGACGACGGAACGCCTGAGCAGCGGA
GAAACGGGACGTGATGCTGATATTGTCACGTATCAGAATCGCGATTATCGGGTGACGTTTGTTGACCTCTATACGGCGTA
CGGTGCGGGCTTTGTGCAGGCGCATTGTGAATTGCTGCCCTTTTATCCCTTATACCGCCCTGAAAGATGGCTCGATTGA

Upstream 100 bases:

>100_bases
AGCCGTGCTGCGGGTAACGCACCTGATAATGCAAACGCCAGACCACTTATCGACACCGGGCAGTATCGGCGGTCGATCAC
TTACGTCGTGAGGGATAAAA

Downstream 100 bases:

>100_bases
TTTGGCTGATATCGCACGCATGAACGACTGGATTGGGTTAACACAGGATAACGAAGCGCGGATAGCGCGATGGAGAGAGA
CAAACCGTGACTAATGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Head-Tail Adaptor

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MPNLDVTDVLFDPDFCDTHLVVTRRFQQTDADGITTSAEEHSGFSGVVTVDRSLENRRMQAGQVISGAILVVTTERLSSG
ETGRDADIVTYQNRDYRVTFVDLYTAYGAGFVQAHCELLPFYPLYRPERWLD

Sequences:

>Translated_132_residues
MPNLDVTDVLFDPDFCDTHLVVTRRFQQTDADGITTSAEEHSGFSGVVTVDRSLENRRMQAGQVISGAILVVTTERLSSG
ETGRDADIVTYQNRDYRVTFVDLYTAYGAGFVQAHCELLPFYPLYRPERWLD
>Mature_131_residues
PNLDVTDVLFDPDFCDTHLVVTRRFQQTDADGITTSAEEHSGFSGVVTVDRSLENRRMQAGQVISGAILVVTTERLSSGE
TGRDADIVTYQNRDYRVTFVDLYTAYGAGFVQAHCELLPFYPLYRPERWLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14900; Mature: 14769

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLDVTDVLFDPDFCDTHLVVTRRFQQTDADGITTSAEEHSGFSGVVTVDRSLENRRMQ
CCCCCCEEEEECCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHC
AGQVISGAILVVTTERLSSGETGRDADIVTYQNRDYRVTFVDLYTAYGAGFVQAHCELLP
CCCEECCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEEHHHCCCEEEEEEEEEC
FYPLYRPERWLD
CCCCCCCCCCCC
>Mature Secondary Structure 
PNLDVTDVLFDPDFCDTHLVVTRRFQQTDADGITTSAEEHSGFSGVVTVDRSLENRRMQ
CCCCCEEEEECCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHC
AGQVISGAILVVTTERLSSGETGRDADIVTYQNRDYRVTFVDLYTAYGAGFVQAHCELLP
CCCEECCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEEHHHCCCEEEEEEEEEC
FYPLYRPERWLD
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA