| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059789
Identifier: 85059789
GI number: 85059789
Start: 3080878
End: 3082545
Strand: Reverse
Name: 85059789
Synonym: SG1811
Alternate gene names: NA
Gene position: 3082545-3080878 (Counterclockwise)
Preceding gene: 85059790
Following gene: 85059788
Centisome position: 73.9
GC content: 57.25
Gene sequence:
>1668_bases GTGACTAATGTTGACACTATCCGCGACTTCCTCGTCAGCCTCAGTTTTCAGGTGGATGAATCGGGGATGCGGAAATTTGA GCGCATCCTCACCGGCGTCACCGCTAATGTGTTAAAGCTGGGCGTGGCAGTCGAGGGGGCAGCGCTGTCCGTACTGAGTT TTACCACACAGATAGCCGCTGGACTGGATAAGGTGTACTGGGTGTCACAACGTACCGGTGCCAGTGCGGCGGGCATAAAG GCATTGGGCTATGCGGCAGCCCAAACCGGCAGCAGTGCCGAAGCAGCGCAGGGCGCGCTGGAGAGCCTGGCGCGATTGAT GCGCAATACCCCCGGTGCAGAAGGCTTCCTGAACTGCCTGGGGGTGCAAACACGGGATGCCCGCGGACGGATGCGTGACA TGTCGGCGATCTTTACCGGTGTCGGGCAAAAACTCGGCCAGATGCCCTATTACCGGGCAAACCAGTATGCACAAATGCTG GGCATCGATGAAAATACCTTGATGGCGATGCGCAGGGGATTGAACGGCTTTACGGCGGATTATCAGTCTATGCTAAGCCG TACCGGTTTTAACGCAGAAAAAGCCGCTGCGCAGTCTAATAAGTTCATGACGGCCATGAAGGGGCTAACGGCGTTATTCG GTATCCTGCGCGATAAGGTCGGCGCAAATCTGGCCGGGGGACTGGCGGGCTTTCTGGACGACCTGAGAAAGAAAATACTC GAAAACTTTCCCAAAATCGAAGACGTGTTGACCCGGATCGTCCGGGGAATGATCCGCGCTGGTGAGATGGTGGGCCGCGT TATCTGGCGCCTGATACAGGCAGCGGGCCAAATTTTTGACTGGTGGCACCGCCTGGATGGTCAGAGCAAAAAGGTGATAA CCACGTTTGGAGCCTTGACTGCCGCGATATGGGCGCTGAACCGGGCGTTTTTCTCCTCGCCGATGGACATCATTACCGGG CTGGCAGCCGCGATATTATTGCTGTGGGATGATTACCAGACCTGGAAGGAAGGGGGAACGTCCTTTATTGACTGGTCGAC GTGGGGATCGGAAATCGAACAGGCGAAAAAGGCGTTCGCGTGGATAGGCGATAAAATCACCGGACTGGTTAACGATGTCG GGGGCTGGCAAAACACCCTGAACATGCTCGCCACCTTTATCGCCGGCGCCTGGGTATCAAAAGTCCTCGGTGCGTTCGGC AAGATTGCCGGTCTGCCCATCCCTCCCTGGTTAAAACTCTGGGGACTGTATGCCGGTTATCTGGTCTCAGACAGAGAAAA CATTGTCACCAGCGCCAAAGCGTCCTGGGACTACAACACCCGACAGATAAAACGTGGCGTGGGCGATAGCCTGAAAGCGC TAGGGATAGATAACGCCTGGGCCAGCAAACATCGCGGCGATGCTTCCGCCGATCCACTGGCGCTCCCGCACGGGATCCGC AACAACAATCCGGGGGATCTGAATTATGCGGGGCAGGCGGGCGCAGAAAGAGAGTCGCCCGGTGGCCGCTTTGCCCGCTT TCAGACGCCGTTTGAGGGGCTGCGGGCCATGGTCTCAACACGATTGAAAAAATCATCAACACCTGGGCACCGGGAAGTGA AAACAACACGGGCGCCTATATTGCGGCGATATCCCGCCAGTTGGGAGTCGCCCCGGATGCGGCGCTGA
Upstream 100 bases:
>100_bases GATGGCTCGATTGATTTGGCTGATATCGCACGCATGAACGACTGGATTGGGTTAACACAGGATAACGAAGCGCGGATAGC GCGATGGAGAGAGACAAACC
Downstream 100 bases:
>100_bases ACCTGGGCAATCCTCAGCTGATAGCGTCGCTGATGGGCGGCATTATTCAGCATGAGAATGGGCGTAATCCCTATAGCAGT GAACTGATTGACCGTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Related Tail Protein; Lytic Transglycosylase Catalytic; Mannosyl-Glycoprotein Endo-Beta-N-Acetylglucosamidase; Phage Glucosaminidase
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MTNVDTIRDFLVSLSFQVDESGMRKFERILTGVTANVLKLGVAVEGAALSVLSFTTQIAAGLDKVYWVSQRTGASAAGIK ALGYAAAQTGSSAEAAQGALESLARLMRNTPGAEGFLNCLGVQTRDARGRMRDMSAIFTGVGQKLGQMPYYRANQYAQML GIDENTLMAMRRGLNGFTADYQSMLSRTGFNAEKAAAQSNKFMTAMKGLTALFGILRDKVGANLAGGLAGFLDDLRKKIL ENFPKIEDVLTRIVRGMIRAGEMVGRVIWRLIQAAGQIFDWWHRLDGQSKKVITTFGALTAAIWALNRAFFSSPMDIITG LAAAILLLWDDYQTWKEGGTSFIDWSTWGSEIEQAKKAFAWIGDKITGLVNDVGGWQNTLNMLATFIAGAWVSKVLGAFG KIAGLPIPPWLKLWGLYAGYLVSDRENIVTSAKASWDYNTRQIKRGVGDSLKALGIDNAWASKHRGDASADPLALPHGIR NNNPGDLNYAGQAGAERESPGGRFARFQTPFEGLRAMVSTRLKKSSTPGHREVKTTRAPILRRYPASWESPRMRR
Sequences:
>Translated_555_residues MTNVDTIRDFLVSLSFQVDESGMRKFERILTGVTANVLKLGVAVEGAALSVLSFTTQIAAGLDKVYWVSQRTGASAAGIK ALGYAAAQTGSSAEAAQGALESLARLMRNTPGAEGFLNCLGVQTRDARGRMRDMSAIFTGVGQKLGQMPYYRANQYAQML GIDENTLMAMRRGLNGFTADYQSMLSRTGFNAEKAAAQSNKFMTAMKGLTALFGILRDKVGANLAGGLAGFLDDLRKKIL ENFPKIEDVLTRIVRGMIRAGEMVGRVIWRLIQAAGQIFDWWHRLDGQSKKVITTFGALTAAIWALNRAFFSSPMDIITG LAAAILLLWDDYQTWKEGGTSFIDWSTWGSEIEQAKKAFAWIGDKITGLVNDVGGWQNTLNMLATFIAGAWVSKVLGAFG KIAGLPIPPWLKLWGLYAGYLVSDRENIVTSAKASWDYNTRQIKRGVGDSLKALGIDNAWASKHRGDASADPLALPHGIR NNNPGDLNYAGQAGAERESPGGRFARFQTPFEGLRAMVSTRLKKSSTPGHREVKTTRAPILRRYPASWESPRMRR >Mature_554_residues TNVDTIRDFLVSLSFQVDESGMRKFERILTGVTANVLKLGVAVEGAALSVLSFTTQIAAGLDKVYWVSQRTGASAAGIKA LGYAAAQTGSSAEAAQGALESLARLMRNTPGAEGFLNCLGVQTRDARGRMRDMSAIFTGVGQKLGQMPYYRANQYAQMLG IDENTLMAMRRGLNGFTADYQSMLSRTGFNAEKAAAQSNKFMTAMKGLTALFGILRDKVGANLAGGLAGFLDDLRKKILE NFPKIEDVLTRIVRGMIRAGEMVGRVIWRLIQAAGQIFDWWHRLDGQSKKVITTFGALTAAIWALNRAFFSSPMDIITGL AAAILLLWDDYQTWKEGGTSFIDWSTWGSEIEQAKKAFAWIGDKITGLVNDVGGWQNTLNMLATFIAGAWVSKVLGAFGK IAGLPIPPWLKLWGLYAGYLVSDRENIVTSAKASWDYNTRQIKRGVGDSLKALGIDNAWASKHRGDASADPLALPHGIRN NNPGDLNYAGQAGAERESPGGRFARFQTPFEGLRAMVSTRLKKSSTPGHREVKTTRAPILRRYPASWESPRMRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60585; Mature: 60454
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNVDTIRDFLVSLSFQVDESGMRKFERILTGVTANVLKLGVAVEGAALSVLSFTTQIAA CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GLDKVYWVSQRTGASAAGIKALGYAAAQTGSSAEAAQGALESLARLMRNTPGAEGFLNCL HHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH GVQTRDARGRMRDMSAIFTGVGQKLGQMPYYRANQYAQMLGIDENTLMAMRRGLNGFTAD CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHH YQSMLSRTGFNAEKAAAQSNKFMTAMKGLTALFGILRDKVGANLAGGLAGFLDDLRKKIL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ENFPKIEDVLTRIVRGMIRAGEMVGRVIWRLIQAAGQIFDWWHRLDGQSKKVITTFGALT HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AAIWALNRAFFSSPMDIITGLAAAILLLWDDYQTWKEGGTSFIDWSTWGSEIEQAKKAFA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHH WIGDKITGLVNDVGGWQNTLNMLATFIAGAWVSKVLGAFGKIAGLPIPPWLKLWGLYAGY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LVSDRENIVTSAKASWDYNTRQIKRGVGDSLKALGIDNAWASKHRGDASADPLALPHGIR HHCCHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCC NNNPGDLNYAGQAGAERESPGGRFARFQTPFEGLRAMVSTRLKKSSTPGHREVKTTRAPI CCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LRRYPASWESPRMRR HHHCCCCCCCCCCCC >Mature Secondary Structure TNVDTIRDFLVSLSFQVDESGMRKFERILTGVTANVLKLGVAVEGAALSVLSFTTQIAA CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GLDKVYWVSQRTGASAAGIKALGYAAAQTGSSAEAAQGALESLARLMRNTPGAEGFLNCL HHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH GVQTRDARGRMRDMSAIFTGVGQKLGQMPYYRANQYAQMLGIDENTLMAMRRGLNGFTAD CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHH YQSMLSRTGFNAEKAAAQSNKFMTAMKGLTALFGILRDKVGANLAGGLAGFLDDLRKKIL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ENFPKIEDVLTRIVRGMIRAGEMVGRVIWRLIQAAGQIFDWWHRLDGQSKKVITTFGALT HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AAIWALNRAFFSSPMDIITGLAAAILLLWDDYQTWKEGGTSFIDWSTWGSEIEQAKKAFA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHH WIGDKITGLVNDVGGWQNTLNMLATFIAGAWVSKVLGAFGKIAGLPIPPWLKLWGLYAGY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LVSDRENIVTSAKASWDYNTRQIKRGVGDSLKALGIDNAWASKHRGDASADPLALPHGIR HHCCHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCC NNNPGDLNYAGQAGAERESPGGRFARFQTPFEGLRAMVSTRLKKSSTPGHREVKTTRAPI CCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LRRYPASWESPRMRR HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA