| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059788
Identifier: 85059788
GI number: 85059788
Start: 3079390
End: 3080370
Strand: Reverse
Name: 85059788
Synonym: SG1810
Alternate gene names: NA
Gene position: 3080370-3079390 (Counterclockwise)
Preceding gene: 85059789
Following gene: 85059787
Centisome position: 73.85
GC content: 55.25
Gene sequence:
>981_bases ATGCCTCAGAACTGGATAAGACAATGCTCGCTGATCGTCGCCGATGAAAAAGGTGAGGGTATCGAACTGTCCGCCTTTCG CACCACGTTCAGTATTTCATGGCCGGATACACGCTGGCCGCGCACGGCCGTGTTTAAAGTCTGGAACCTGAAACCGGAGA CGGTGAATCGCATTCAGGCGGACGAGTTTGCTCGTGTGCAATTAATGGCAGGGTATCAGGATAACACGGGGTTGATTTTC ACCGGAAACATCTGCTATTCCCTGACCGGCAGAGATAACCCGACCGATACCTTTGTGATGATTCAGGCGGTCGATGCCCA TGATGCTTACGATTACGCCACTCTTAATACAACCCTGGGTGCAGGCCATACCCAAGCCGAACAACACCAGACGCTACTCA CTGGCCTGGCCCCCTACGGTATTGTGAAAGGCACGACGCCTGATTTTGAGGCGACGCGCTTTCCCCGTGGAAAAACCTAC TTTGGCATGGCGCGGGATGCGATAGATAACCTCGCAGGGCAGTGTCGCGCGTCCTGGCAATATATCAACGGACAGCTGGT GATGGTACCGGAAGAGACCTACGTGCAGGAGGCGGTGGTGCTCAACAGCGCCACAGGGCTGATAGGTTTGCCGCAGCAGA CGATTGAGGCCGGTGTCAATGTTCGCTGTCTCATCAACCCGACAATTCAGGTGAATGGCCTTATCCTGCTGGATGAAGCG CTGGTTTACCGCACGATGTTACCCGAACGCGATATTGCCGCGGTGCCGGGCCGGATAGGGACGGTCAATCATGGCAGCGT GCAACAGACCGAAGGGGCATTATCGCCACCGGCGAGCCTGGCGACCGATGGGGCGTATATTGTGAAGAATATTACCTACA GCGGCGATACGCGGGGTAAAGCCTGGTATATGGATCTGGTGTGCGTGGCGAAAGGCGCGGCGGATTTGATGAAAACCTCA ACACTGAACAAGGTGGGATAA
Upstream 100 bases:
>100_bases GGCCCGCTGAGCTGACGATGGAGGTGGGGTTTGCCGGCGGCGGCTCACTGCTCTGGATAACCGATTAATCCGCACTGGCA GTTTTTTTACGGAAAACACC
Downstream 100 bases:
>100_bases TGACGATTTCCGTATCAGAACGCGCGGGGGATAAGCAGGCGCTGCTTGAGGTCCTGCGCCACACTATATTGTCCCAGCTG CGGGTCGCTCTGCCGGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MPQNWIRQCSLIVADEKGEGIELSAFRTTFSISWPDTRWPRTAVFKVWNLKPETVNRIQADEFARVQLMAGYQDNTGLIF TGNICYSLTGRDNPTDTFVMIQAVDAHDAYDYATLNTTLGAGHTQAEQHQTLLTGLAPYGIVKGTTPDFEATRFPRGKTY FGMARDAIDNLAGQCRASWQYINGQLVMVPEETYVQEAVVLNSATGLIGLPQQTIEAGVNVRCLINPTIQVNGLILLDEA LVYRTMLPERDIAAVPGRIGTVNHGSVQQTEGALSPPASLATDGAYIVKNITYSGDTRGKAWYMDLVCVAKGAADLMKTS TLNKVG
Sequences:
>Translated_326_residues MPQNWIRQCSLIVADEKGEGIELSAFRTTFSISWPDTRWPRTAVFKVWNLKPETVNRIQADEFARVQLMAGYQDNTGLIF TGNICYSLTGRDNPTDTFVMIQAVDAHDAYDYATLNTTLGAGHTQAEQHQTLLTGLAPYGIVKGTTPDFEATRFPRGKTY FGMARDAIDNLAGQCRASWQYINGQLVMVPEETYVQEAVVLNSATGLIGLPQQTIEAGVNVRCLINPTIQVNGLILLDEA LVYRTMLPERDIAAVPGRIGTVNHGSVQQTEGALSPPASLATDGAYIVKNITYSGDTRGKAWYMDLVCVAKGAADLMKTS TLNKVG >Mature_325_residues PQNWIRQCSLIVADEKGEGIELSAFRTTFSISWPDTRWPRTAVFKVWNLKPETVNRIQADEFARVQLMAGYQDNTGLIFT GNICYSLTGRDNPTDTFVMIQAVDAHDAYDYATLNTTLGAGHTQAEQHQTLLTGLAPYGIVKGTTPDFEATRFPRGKTYF GMARDAIDNLAGQCRASWQYINGQLVMVPEETYVQEAVVLNSATGLIGLPQQTIEAGVNVRCLINPTIQVNGLILLDEAL VYRTMLPERDIAAVPGRIGTVNHGSVQQTEGALSPPASLATDGAYIVKNITYSGDTRGKAWYMDLVCVAKGAADLMKTST LNKVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35631; Mature: 35500
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQNWIRQCSLIVADEKGEGIELSAFRTTFSISWPDTRWPRTAVFKVWNLKPETVNRIQA CCHHHHHHEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEEECCCHHHHHHCCC DEFARVQLMAGYQDNTGLIFTGNICYSLTGRDNPTDTFVMIQAVDAHDAYDYATLNTTLG CCCEEEEEEECCCCCCCEEEECCEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCC AGHTQAEQHQTLLTGLAPYGIVKGTTPDFEATRFPRGKTYFGMARDAIDNLAGQCRASWQ CCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHEEEEE YINGQLVMVPEETYVQEAVVLNSATGLIGLPQQTIEAGVNVRCLINPTIQVNGLILLDEA EECCEEEEECCHHHHHHEEEEECCCCEEECCHHHHHCCCCEEEEECCCEEECCEEEECHH LVYRTMLPERDIAAVPGRIGTVNHGSVQQTEGALSPPASLATDGAYIVKNITYSGDTRGK HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEEEECCCCCCC AWYMDLVCVAKGAADLMKTSTLNKVG EEEEEEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure PQNWIRQCSLIVADEKGEGIELSAFRTTFSISWPDTRWPRTAVFKVWNLKPETVNRIQA CHHHHHHEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEEECCCHHHHHHCCC DEFARVQLMAGYQDNTGLIFTGNICYSLTGRDNPTDTFVMIQAVDAHDAYDYATLNTTLG CCCEEEEEEECCCCCCCEEEECCEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCC AGHTQAEQHQTLLTGLAPYGIVKGTTPDFEATRFPRGKTYFGMARDAIDNLAGQCRASWQ CCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHEEEEE YINGQLVMVPEETYVQEAVVLNSATGLIGLPQQTIEAGVNVRCLINPTIQVNGLILLDEA EECCEEEEECCHHHHHHEEEEECCCCEEECCHHHHHCCCCEEEEECCCEEECCEEEECHH LVYRTMLPERDIAAVPGRIGTVNHGSVQQTEGALSPPASLATDGAYIVKNITYSGDTRGK HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEEEECCCCCCC AWYMDLVCVAKGAADLMKTSTLNKVG EEEEEEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA