| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yfjG [H]
Identifier: 85059781
GI number: 85059781
Start: 3070522
End: 3070956
Strand: Reverse
Name: yfjG [H]
Synonym: SG1803
Alternate gene names: 85059781
Gene position: 3070956-3070522 (Counterclockwise)
Preceding gene: 85059784
Following gene: 85059780
Centisome position: 73.62
GC content: 51.26
Gene sequence:
>435_bases ATGCCTCATATTACGCGCTCCGCGCTGGTTCCTTATAGCGCAAAGCAAATGTTCGCCTTGGTTAATAATATCAGCGCCTA TCCGGAATTCATTCCAGGCTGTACCGCCAGCCGGGTGCTTGAGCAGAACGGCAGCGAACTGACCGCAGAGATGAATGTCT CTAAAGCGGGCATAAGCAAATCCTTCACCACCCGCAATGTTATCACTGAAAATCAGAGTATTGTGATGCGCTTGGTGGAA GGCCCCTTCAGCTCCTTTGCTGGCGACTGGCGTTTCATCCCCCTTAGCGAAGAGACCAGCAAGGTTGAATTCCATCTCGA TTTTGAATTCAAGAGCAAGCTGATTGAACTGGCGTTTGGGCGTATTTTCAAGGAGATGGCGAACAGCATGGTCATGGCGT TCACCCGCCGGGCCAAAGAGGTTTACCATGCCTGA
Upstream 100 bases:
>100_bases GCTTTTGATCACGGACGTGGCATAGAGCACGTAATGGTCTTTTTGTCTCGTTGGAGATAAATGATAATATTAGGGTGAAT CGATAAAAACAGGAAAGATT
Downstream 100 bases:
>100_bases CATCCGGGTCGAGGTCGTTTACGCCCTGCCGGAGCGCCAGTATCTGCGACAGCTGGTGCTGGAGGAGGGGAGTACCCTGG AGCAGGCGATTCACGCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPHITRSALVPYSAKQMFALVNNISAYPEFIPGCTASRVLEQNGSELTAEMNVSKAGISKSFTTRNVITENQSIVMRLVE GPFSSFAGDWRFIPLSEETSKVEFHLDFEFKSKLIELAFGRIFKEMANSMVMAFTRRAKEVYHA
Sequences:
>Translated_144_residues MPHITRSALVPYSAKQMFALVNNISAYPEFIPGCTASRVLEQNGSELTAEMNVSKAGISKSFTTRNVITENQSIVMRLVE GPFSSFAGDWRFIPLSEETSKVEFHLDFEFKSKLIELAFGRIFKEMANSMVMAFTRRAKEVYHA >Mature_143_residues PHITRSALVPYSAKQMFALVNNISAYPEFIPGCTASRVLEQNGSELTAEMNVSKAGISKSFTTRNVITENQSIVMRLVEG PFSSFAGDWRFIPLSEETSKVEFHLDFEFKSKLIELAFGRIFKEMANSMVMAFTRRAKEVYHA
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Homo sapiens, GI151101384, Length=131, Percent_Identity=29.7709923664122, Blast_Score=63, Evalue=9e-11, Organism=Homo sapiens, GI151101386, Length=131, Percent_Identity=29.7709923664122, Blast_Score=63, Evalue=9e-11, Organism=Escherichia coli, GI1788972, Length=144, Percent_Identity=64.5833333333333, Blast_Score=212, Evalue=7e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 16252; Mature: 16121
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHITRSALVPYSAKQMFALVNNISAYPEFIPGCTASRVLEQNGSELTAEMNVSKAGISK CCCCCCHHCCCCHHHHHHHHHHHHHHCHHHCCCCHHHHHHHCCCCEEEEECCCHHHCCCC SFTTRNVITENQSIVMRLVEGPFSSFAGDWRFIPLSEETSKVEFHLDFEFKSKLIELAFG CCCHHHHHCCCHHHHHHHHHCCHHHCCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHH RIFKEMANSMVMAFTRRAKEVYHA HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PHITRSALVPYSAKQMFALVNNISAYPEFIPGCTASRVLEQNGSELTAEMNVSKAGISK CCCCCHHCCCCHHHHHHHHHHHHHHCHHHCCCCHHHHHHHCCCCEEEEECCCHHHCCCC SFTTRNVITENQSIVMRLVEGPFSSFAGDWRFIPLSEETSKVEFHLDFEFKSKLIELAFG CCCHHHHHCCCHHHHHHHHHCCHHHCCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHH RIFKEMANSMVMAFTRRAKEVYHA HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7524073; 9205837; 9278503 [H]