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The map label for this gene is yfdK [H]

Identifier: 85059784

GI number: 85059784

Start: 3074971

End: 3075399

Strand: Reverse

Name: yfdK [H]

Synonym: SG1806

Alternate gene names: 85059784

Gene position: 3075399-3074971 (Counterclockwise)

Preceding gene: 85059785

Following gene: 85059781

Centisome position: 73.73

GC content: 41.26

Gene sequence:

>429_bases
ATGAATGATTACTTTTATAGTGCCACAACAAATGGCTTTTATCATATATCTATGAAGTCAATCTATGAAGACTCGGATAA
TGGCTGGCCAGAGGATGCCGTCCCCGTGAGTAATGAGCTTTATCAAGCGCTTCTTGAGGGACAGTCAAAAAATAAAATAA
TTAAAGCTAACAAGAATGGAATGCCTGTATTAGGAGATAGGCCAGCACCAACAGAAGAGCAAAATCTTTCTATGGCTCAG
TCAAAAAAAAGTATGCTGTTAGAGCAGGCCACAGGGAAAATTATACCATTACAAGATGCGGTTGATCTGAACATGGCAAC
ACAAGTCGAAGAAACGACACTGCTGATGTGGAAAAAATATCGAGTGATGCTTACCCGACTTGATGTTAGCAAAGCGACGG
ATATAGCGTGGCCGCAGTGTCCTGAATAG

Upstream 100 bases:

>100_bases
CAATGCTTCTTTTTACGTAGCAACGAAAGGCTCTGTACGCGGAAACATCGCTGGTTTTCCTGTGTATTGGTCAGCTGTAG
GATTTTAAGGTGACAAAATC

Downstream 100 bases:

>100_bases
CTTTTTTTATAAAATGGGGCTTTGTTACATAATAGGGAATCATACTGTTTTGCCATGCTCGGTTTGGAAGAAAATGCTTG
TCACCTGAGGTGTGCTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MNDYFYSATTNGFYHISMKSIYEDSDNGWPEDAVPVSNELYQALLEGQSKNKIIKANKNGMPVLGDRPAPTEEQNLSMAQ
SKKSMLLEQATGKIIPLQDAVDLNMATQVEETTLLMWKKYRVMLTRLDVSKATDIAWPQCPE

Sequences:

>Translated_142_residues
MNDYFYSATTNGFYHISMKSIYEDSDNGWPEDAVPVSNELYQALLEGQSKNKIIKANKNGMPVLGDRPAPTEEQNLSMAQ
SKKSMLLEQATGKIIPLQDAVDLNMATQVEETTLLMWKKYRVMLTRLDVSKATDIAWPQCPE
>Mature_142_residues
MNDYFYSATTNGFYHISMKSIYEDSDNGWPEDAVPVSNELYQALLEGQSKNKIIKANKNGMPVLGDRPAPTEEQNLSMAQ
SKKSMLLEQATGKIIPLQDAVDLNMATQVEETTLLMWKKYRVMLTRLDVSKATDIAWPQCPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymfS [H]

Homologues:

Organism=Escherichia coli, GI1788696, Length=141, Percent_Identity=35.4609929078014, Blast_Score=77, Evalue=4e-16,
Organism=Escherichia coli, GI1787637, Length=63, Percent_Identity=50.7936507936508, Blast_Score=67, Evalue=4e-13,
Organism=Escherichia coli, GI2367120, Length=63, Percent_Identity=50.7936507936508, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 16036; Mature: 16036

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDYFYSATTNGFYHISMKSIYEDSDNGWPEDAVPVSNELYQALLEGQSKNKIIKANKNG
CCCEEEEECCCCEEEEEEHHEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCC
MPVLGDRPAPTEEQNLSMAQSKKSMLLEQATGKIIPLQDAVDLNMATQVEETTLLMWKKY
CCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHH
RVMLTRLDVSKATDIAWPQCPE
HHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDYFYSATTNGFYHISMKSIYEDSDNGWPEDAVPVSNELYQALLEGQSKNKIIKANKNG
CCCEEEEECCCCEEEEEEHHEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCC
MPVLGDRPAPTEEQNLSMAQSKKSMLLEQATGKIIPLQDAVDLNMATQVEETTLLMWKKY
CCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHH
RVMLTRLDVSKATDIAWPQCPE
HHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]