| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is cysW
Identifier: 85059685
GI number: 85059685
Start: 2917704
End: 2918573
Strand: Reverse
Name: cysW
Synonym: SG1707
Alternate gene names: 85059685
Gene position: 2918573-2917704 (Counterclockwise)
Preceding gene: 85059686
Following gene: 85059684
Centisome position: 69.97
GC content: 59.31
Gene sequence:
>870_bases ATGACAGATTTCTCCGTGTTCAACGGCGCCGCGCGCGCGCCTTTTCCCTGGGGAAAATGGCTATTGATCGGCCTCGGCTC AGTGGTATCGCTGCTGTTGCTGGTGGTGCCGCTGATTTCAATTTTCGCCACCGCACTGGCGGAAGGACTGGCGGCGGTGG GGCGCAATCTCAACGATAGCGACATGCTGCACGCCATTTGGCTGACGGTGCTCATCGCGCTGATAACCGTACCGGTGAAT GTGGTGTTCGGCACCTTAATGGCCTGGCTGGTGACGCGCTTCAATTTTCGCGGCCGCCAGCTATTGCTTACGCTGATGGA TGTGCCTTTCGCGGTATCGCCCGTGGTGGCGGGATTGCTATACCTCCTGTTTTACGGGACTAACGGCCCCCTCGGAGGCT GGCTGGACGAGCATAATATGCAGTTGATGTTCTCATGGCCGGGGATGGTGCTGGTGACGATATTTGTTACCTGTCCGTTT GTGGTGCGCGAATTGGTGCCGGTGATGCTGAGCCAGGGCAGCCAGGAGGACGAGGCCGCGATCCTGTTGGGTGCATCCAG TTGGCAGATGTTTCGCCGCGTCACGTTGCCCAACATCTACTGGGCGCTGCTGTATGGCGTGATCCTGACCAACGCCCGCG CAATCGGCGAGTTCGGCGCGGTATCGGTGGTATCGGGGTCTATCCGCGGCGAAACCTATACCCTGCCGCTGCAGGTGGAA TTACTGCATCAGGATTACAACACCGTGGGCGCGTTTACCGCCGCCGCGCTGCTGACTCTGATGGCGATTGTGACATTATT CTTGAAGAGCGGGCTGCAGTGGCGTCTGGCGCGCCATCAGGCAGAGCTTCAACCGGGGGACACACAATGA
Upstream 100 bases:
>100_bases CCAGCGCTATCGCCTCGGTAATCCTGGTGGCGTCGCTGCTGCTGCTCTTCGCCATTAACGTGCTGCAATCCCGCTTCGGC CGTCGGTTGGGAGGACAATG
Downstream 100 bases:
>100_bases GTATAGCGATCGATAAGGTCGGCAAGTTTTTTGCCAACAGCAAAGTATTGAACGATATTTCGCTGGATATCGCCTCCGGG GAAATGGTCGTGCTGCTGGG
Product: sulfate/thiosulfate transporter permease subunit
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTDFSVFNGAARAPFPWGKWLLIGLGSVVSLLLLVVPLISIFATALAEGLAAVGRNLNDSDMLHAIWLTVLIALITVPVN VVFGTLMAWLVTRFNFRGRQLLLTLMDVPFAVSPVVAGLLYLLFYGTNGPLGGWLDEHNMQLMFSWPGMVLVTIFVTCPF VVRELVPVMLSQGSQEDEAAILLGASSWQMFRRVTLPNIYWALLYGVILTNARAIGEFGAVSVVSGSIRGETYTLPLQVE LLHQDYNTVGAFTAAALLTLMAIVTLFLKSGLQWRLARHQAELQPGDTQ
Sequences:
>Translated_289_residues MTDFSVFNGAARAPFPWGKWLLIGLGSVVSLLLLVVPLISIFATALAEGLAAVGRNLNDSDMLHAIWLTVLIALITVPVN VVFGTLMAWLVTRFNFRGRQLLLTLMDVPFAVSPVVAGLLYLLFYGTNGPLGGWLDEHNMQLMFSWPGMVLVTIFVTCPF VVRELVPVMLSQGSQEDEAAILLGASSWQMFRRVTLPNIYWALLYGVILTNARAIGEFGAVSVVSGSIRGETYTLPLQVE LLHQDYNTVGAFTAAALLTLMAIVTLFLKSGLQWRLARHQAELQPGDTQ >Mature_288_residues TDFSVFNGAARAPFPWGKWLLIGLGSVVSLLLLVVPLISIFATALAEGLAAVGRNLNDSDMLHAIWLTVLIALITVPVNV VFGTLMAWLVTRFNFRGRQLLLTLMDVPFAVSPVVAGLLYLLFYGTNGPLGGWLDEHNMQLMFSWPGMVLVTIFVTCPFV VRELVPVMLSQGSQEDEAAILLGASSWQMFRRVTLPNIYWALLYGVILTNARAIGEFGAVSVVSGSIRGETYTLPLQVEL LHQDYNTVGAFTAAALLTLMAIVTLFLKSGLQWRLARHQAELQPGDTQ
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=276, Percent_Identity=79.3478260869565, Blast_Score=444, Evalue=1e-126, Organism=Escherichia coli, GI1788764, Length=223, Percent_Identity=36.7713004484305, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI1786980, Length=223, Percent_Identity=32.2869955156951, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31623; Mature: 31492
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFSVFNGAARAPFPWGKWLLIGLGSVVSLLLLVVPLISIFATALAEGLAAVGRNLNDS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DMLHAIWLTVLIALITVPVNVVFGTLMAWLVTRFNFRGRQLLLTLMDVPFAVSPVVAGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHH YLLFYGTNGPLGGWLDEHNMQLMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAA HHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE ILLGASSWQMFRRVTLPNIYWALLYGVILTNARAIGEFGAVSVVSGSIRGETYTLPLQVE EEEECHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCHHHEECCCCCCEEEEEEEHH LLHQDYNTVGAFTAAALLTLMAIVTLFLKSGLQWRLARHQAELQPGDTQ HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TDFSVFNGAARAPFPWGKWLLIGLGSVVSLLLLVVPLISIFATALAEGLAAVGRNLNDS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DMLHAIWLTVLIALITVPVNVVFGTLMAWLVTRFNFRGRQLLLTLMDVPFAVSPVVAGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHH YLLFYGTNGPLGGWLDEHNMQLMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAA HHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE ILLGASSWQMFRRVTLPNIYWALLYGVILTNARAIGEFGAVSVVSGSIRGETYTLPLQVE EEEECHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCHHHEECCCCCCEEEEEEEHH LLHQDYNTVGAFTAAALLTLMAIVTLFLKSGLQWRLARHQAELQPGDTQ HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]