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The map label for this gene is ccmH [H]

Identifier: 85059611

GI number: 85059611

Start: 2792519

End: 2792983

Strand: Reverse

Name: ccmH [H]

Synonym: SG1633

Alternate gene names: 85059611

Gene position: 2792983-2792519 (Counterclockwise)

Preceding gene: 85059612

Following gene: 85059610

Centisome position: 66.96

GC content: 58.92

Gene sequence:

>465_bases
ATGAGGCGCGCGCCGATATTGGCCTTGCTGGCCGGTCTGCTGCTGAGCGCTGCCGCGGCTGCGGATATTCATCAATTCAG
CAGCGAGGCTCAAGAACAGCACTATCGCGCGTTGATAGGCGAGCTGCGCTGCCCGAAATGCCAGAATACCAGCATCGCCG
ATTCCAATGCCGTTATTGCCGGTGATATGCGTGATAAGGTCTATTCCCTGATGCAACAAGGCCAGAGTGATCAGCAAATC
ATCGATTATATGGTGGCGCGTTATGGCCGTTTCGTGACCTATACGCCGCCGTTAAATCCGCTGACTCTGCTGTTATGGCT
GGTACCGCTGCTGTTTGTCGGGGCGGGCGCAACGGTGGTTATCGTCGGGGCCGCCCGGCGCAAACTCCCCGCCGGCGCAT
TGTCGGCGGCGCAAAAGCAGCGTTTTGCAAGGCTTCTCCCGCCCTCGGACAGGAATGCGCCATGA

Upstream 100 bases:

>100_bases
GGTTAGGGGATCGTATGCTATCGCCACGCCGGCGATATGAACGCCCAGGTCTGGCGCCAGGACGTCGAGCCGCTGTATCG
CCGGTATGGGGGGAGCAAAA

Downstream 100 bases:

>100_bases
TAGTCTTCGTCTTCCTCGTCGTCTTGCTGTTGCTTATAGCATGCGCGCTGTTTGTGCTGCCGGCGTTGGGCTATGGCGTT
AAGTCTGCCGCCATGAGCCG

Product: putative cytochrome c-type biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRRAPILALLAGLLLSAAAAADIHQFSSEAQEQHYRALIGELRCPKCQNTSIADSNAVIAGDMRDKVYSLMQQGQSDQQI
IDYMVARYGRFVTYTPPLNPLTLLLWLVPLLFVGAGATVVIVGAARRKLPAGALSAAQKQRFARLLPPSDRNAP

Sequences:

>Translated_154_residues
MRRAPILALLAGLLLSAAAAADIHQFSSEAQEQHYRALIGELRCPKCQNTSIADSNAVIAGDMRDKVYSLMQQGQSDQQI
IDYMVARYGRFVTYTPPLNPLTLLLWLVPLLFVGAGATVVIVGAARRKLPAGALSAAQKQRFARLLPPSDRNAP
>Mature_154_residues
MRRAPILALLAGLLLSAAAAADIHQFSSEAQEQHYRALIGELRCPKCQNTSIADSNAVIAGDMRDKVYSLMQQGQSDQQI
IDYMVARYGRFVTYTPPLNPLTLLLWLVPLLFVGAGATVVIVGAARRKLPAGALSAAQKQRFARLLPPSDRNAP

Specific function: May be required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=119, Percent_Identity=57.9831932773109, Blast_Score=152, Evalue=1e-38,
Organism=Escherichia coli, GI1790512, Length=88, Percent_Identity=40.9090909090909, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 16714; Mature: 16714

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAPILALLAGLLLSAAAAADIHQFSSEAQEQHYRALIGELRCPKCQNTSIADSNAVIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
GDMRDKVYSLMQQGQSDQQIIDYMVARYGRFVTYTPPLNPLTLLLWLVPLLFVGAGATVV
CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEE
IVGAARRKLPAGALSAAQKQRFARLLPPSDRNAP
EECCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRRAPILALLAGLLLSAAAAADIHQFSSEAQEQHYRALIGELRCPKCQNTSIADSNAVIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
GDMRDKVYSLMQQGQSDQQIIDYMVARYGRFVTYTPPLNPLTLLLWLVPLLFVGAGATVV
CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEE
IVGAARRKLPAGALSAAQKQRFARLLPPSDRNAP
EECCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 7635817 [H]