| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yfbV [C]
Identifier: 85059583
GI number: 85059583
Start: 2757423
End: 2757878
Strand: Reverse
Name: yfbV [C]
Synonym: SG1605
Alternate gene names: 85059583
Gene position: 2757878-2757423 (Counterclockwise)
Preceding gene: 85059586
Following gene: 85059582
Centisome position: 66.12
GC content: 60.09
Gene sequence:
>456_bases ATGTCGACACTCCCTTCCGGTTCGGTAAGTTGGTACAAGATATTCCAGCGCGGACAAAACTATATGAAGGCCTGGCCCGC CGAAAAAAGCCTGGCGCCGATGTTCCCGGAGCATCGCGTCGTGCGCGCCACCCGCTTCGGCGTGCGCTTCATGCCGGCGG TAGCGGTCTTTACCCTGACCTGGCAAATCGCTTTGGGAGGACAGCTCGGCCCGGCGGTGGCGACCGCCATTTTCGCCTGT AGCCTGCCGATGCAGGGGCTGTGGTGGCTCGGCAAGCGTTCGATAACGCCGCTGCCCCCCTCGCTGCTGACCTGTTTTCA TGAGGTACGGCAAAAGCTCAATGAGGCGGGCCAGTCGCTGGCGCCGGTGGAAGGCGTGCCGACCTATCAGATGCTGGTCG AGGTGTTGAAACGGGCCTTCAAACTGCTTGATAAAGCGTTTCTGGATGATTTGTAA
Upstream 100 bases:
>100_bases CGACAGAGCGCGGTAAAGACAAAATATATTTAATTGTTATAAAATCCATAGTGAAGTTACTCTAATTTTTTAATAATTGT TCATAAAGTTGAGGTCCGCT
Downstream 100 bases:
>100_bases CGTCTAAAGGCCCTGTCGGCACGCCCGGTGCCGGCCCCGCCGTCATAAATATTTCATCCGGTCATGGTTTACATCAAACA AAGCAGGGTTTGCAGTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSTLPSGSVSWYKIFQRGQNYMKAWPAEKSLAPMFPEHRVVRATRFGVRFMPAVAVFTLTWQIALGGQLGPAVATAIFAC SLPMQGLWWLGKRSITPLPPSLLTCFHEVRQKLNEAGQSLAPVEGVPTYQMLVEVLKRAFKLLDKAFLDDL
Sequences:
>Translated_151_residues MSTLPSGSVSWYKIFQRGQNYMKAWPAEKSLAPMFPEHRVVRATRFGVRFMPAVAVFTLTWQIALGGQLGPAVATAIFAC SLPMQGLWWLGKRSITPLPPSLLTCFHEVRQKLNEAGQSLAPVEGVPTYQMLVEVLKRAFKLLDKAFLDDL >Mature_150_residues STLPSGSVSWYKIFQRGQNYMKAWPAEKSLAPMFPEHRVVRATRFGVRFMPAVAVFTLTWQIALGGQLGPAVATAIFACS LPMQGLWWLGKRSITPLPPSLLTCFHEVRQKLNEAGQSLAPVEGVPTYQMLVEVLKRAFKLLDKAFLDDL
Specific function: Unknown
COG id: COG3092
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0208 family
Homologues:
Organism=Escherichia coli, GI1788632, Length=151, Percent_Identity=68.8741721854305, Blast_Score=219, Evalue=5e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1605_SODGM (Q2NSJ5)
Other databases:
- EMBL: AP008232 - RefSeq: YP_455285.1 - STRING: Q2NSJ5 - GeneID: 3867783 - GenomeReviews: AP008232_GR - KEGG: sgl:SG1605 - NMPDR: fig|343509.6.peg.3424 - eggNOG: COG3092 - HOGENOM: HBG297010 - OMA: FACSLPM - PhylomeDB: Q2NSJ5 - ProtClustDB: PRK01816 - BioCyc: SGLO343509:SG1605-MONOMER - HAMAP: MF_01101 - InterPro: IPR007334
Pfam domain/function: PF04217 DUF412
EC number: NA
Molecular weight: Translated: 16866; Mature: 16735
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xfb4f4a0)-; HASH(0xf818184)-;
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLPSGSVSWYKIFQRGQNYMKAWPAEKSLAPMFPEHRVVRATRFGVRFMPAVAVFTLT CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WQIALGGQLGPAVATAIFACSLPMQGLWWLGKRSITPLPPSLLTCFHEVRQKLNEAGQSL HHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC APVEGVPTYQMLVEVLKRAFKLLDKAFLDDL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure STLPSGSVSWYKIFQRGQNYMKAWPAEKSLAPMFPEHRVVRATRFGVRFMPAVAVFTLT CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WQIALGGQLGPAVATAIFACSLPMQGLWWLGKRSITPLPPSLLTCFHEVRQKLNEAGQSL HHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC APVEGVPTYQMLVEVLKRAFKLLDKAFLDDL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA