| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yfbT [H]
Identifier: 85059582
GI number: 85059582
Start: 2756078
End: 2756740
Strand: Reverse
Name: yfbT [H]
Synonym: SG1604
Alternate gene names: 85059582
Gene position: 2756740-2756078 (Counterclockwise)
Preceding gene: 85059583
Following gene: 85059579
Centisome position: 66.09
GC content: 60.03
Gene sequence:
>663_bases GTGCGCGGTTTAGGCTTTTTGTTTGACCTTGATGGAACATTGATTGATTCGCTGCCGGTGGTGGAATTGGCCTGGGGAAA TTGGGCGCGTCGCCATGGCGTGCCGGAAGCGGAGGTATTGAATTTTATACACGGCAAACAAGCTATTACCTCGCTGCGCC ATTTTATGCCGCTGCAAAGCGAAAAGACCATTCAACACGAATATCGTCTTTTAGAACGCTTTGAAGCTGAAACGATTGAG GGCGTAAGTGCGCTGCCCGGCGCGCGCGAGCTGCTTACCGAGCTCAACCGCCTGCAACTGCCGTGGGCGATTGTCACTTC CGGCTCGCTGCCGGTCGCCTCTGCCCGCGTGCGTGCAGGACAGCTCCCGGCGCCGCCGGTGCTCATTACCGCGGAACAGG TGCCGCGCGGCAAACCGCAGCCGGATCCGTATTTGCTCGGCGCCGAAAAGCTGGGTTTCCGGCCTGCGGACTGCATTGTC GTGGAAGATGCTATCGCCGGCATCCAGTCAGGGCTTGCGGCGGGGTGTCCGGTGATTGCCGTGAATCCGACGCCGGAAAC GCCGCAGAAAGACGCGGTGGGAATAATTGTCGCTTCGCTGTGGCAGCTCAGGGTGACCCGGGAAGGGGATTACGCCCTGG TGAGTCGTCACGAGGTCGCCTGA
Upstream 100 bases:
>100_bases ATGCTGGCGGTTTGGCAAGCCTGTCCGCGTCAATATCATTTGAGTGCGGTAGAAATTTCGCAAATTATCAATGCCTGAAG ACGGAGTAGAGGAGCGGCTT
Downstream 100 bases:
>100_bases GGCCTGAAAGGGCGACGGTGCAAGCCGGAGCGAGAAGTCAGCAGAGGTCGTAGTAGCCGCAATCTAGGCGAAGGGCCGAA CGAGAAGGAGCGTCAAACGC
Product: putative phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MRGLGFLFDLDGTLIDSLPVVELAWGNWARRHGVPEAEVLNFIHGKQAITSLRHFMPLQSEKTIQHEYRLLERFEAETIE GVSALPGARELLTELNRLQLPWAIVTSGSLPVASARVRAGQLPAPPVLITAEQVPRGKPQPDPYLLGAEKLGFRPADCIV VEDAIAGIQSGLAAGCPVIAVNPTPETPQKDAVGIIVASLWQLRVTREGDYALVSRHEVA
Sequences:
>Translated_220_residues MRGLGFLFDLDGTLIDSLPVVELAWGNWARRHGVPEAEVLNFIHGKQAITSLRHFMPLQSEKTIQHEYRLLERFEAETIE GVSALPGARELLTELNRLQLPWAIVTSGSLPVASARVRAGQLPAPPVLITAEQVPRGKPQPDPYLLGAEKLGFRPADCIV VEDAIAGIQSGLAAGCPVIAVNPTPETPQKDAVGIIVASLWQLRVTREGDYALVSRHEVA >Mature_220_residues MRGLGFLFDLDGTLIDSLPVVELAWGNWARRHGVPEAEVLNFIHGKQAITSLRHFMPLQSEKTIQHEYRLLERFEAETIE GVSALPGARELLTELNRLQLPWAIVTSGSLPVASARVRAGQLPAPPVLITAEQVPRGKPQPDPYLLGAEKLGFRPADCIV VEDAIAGIQSGLAAGCPVIAVNPTPETPQKDAVGIIVASLWQLRVTREGDYALVSRHEVA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate glucose 6-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=187, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI87082080, Length=208, Percent_Identity=62.0192307692308, Blast_Score=244, Evalue=5e-66, Organism=Escherichia coli, GI1789046, Length=193, Percent_Identity=29.5336787564767, Blast_Score=64, Evalue=5e-12, Organism=Escherichia coli, GI1789787, Length=202, Percent_Identity=27.7227722772277, Blast_Score=64, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6321833, Length=233, Percent_Identity=30.0429184549356, Blast_Score=89, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6321834, Length=242, Percent_Identity=29.7520661157025, Blast_Score=86, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6322136, Length=218, Percent_Identity=32.5688073394495, Blast_Score=83, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6320905, Length=212, Percent_Identity=32.0754716981132, Blast_Score=79, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR023198 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23900; Mature: 23900
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLGFLFDLDGTLIDSLPVVELAWGNWARRHGVPEAEVLNFIHGKQAITSLRHFMPLQS CCCCCEEEECCCHHHCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC EKTIQHEYRLLERFEAETIEGVSALPGARELLTELNRLQLPWAIVTSGSLPVASARVRAG CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCC QLPAPPVLITAEQVPRGKPQPDPYLLGAEKLGFRPADCIVVEDAIAGIQSGLAAGCPVIA CCCCCCEEEECCCCCCCCCCCCCEEECHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCEEE VNPTPETPQKDAVGIIVASLWQLRVTREGDYALVSRHEVA ECCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEECCCCCC >Mature Secondary Structure MRGLGFLFDLDGTLIDSLPVVELAWGNWARRHGVPEAEVLNFIHGKQAITSLRHFMPLQS CCCCCEEEECCCHHHCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC EKTIQHEYRLLERFEAETIEGVSALPGARELLTELNRLQLPWAIVTSGSLPVASARVRAG CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCC QLPAPPVLITAEQVPRGKPQPDPYLLGAEKLGFRPADCIVVEDAIAGIQSGLAAGCPVIA CCCCCCEEEECCCCCCCCCCCCCEEECHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCEEE VNPTPETPQKDAVGIIVASLWQLRVTREGDYALVSRHEVA ECCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]