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The map label for this gene is ldcA [C]

Identifier: 85059500

GI number: 85059500

Start: 2567393

End: 2568451

Strand: Reverse

Name: ldcA [C]

Synonym: SG1522

Alternate gene names: 85059500

Gene position: 2568451-2567393 (Counterclockwise)

Preceding gene: 85059501

Following gene: 85059498

Centisome position: 61.58

GC content: 43.91

Gene sequence:

>1059_bases
ATGAAGTATCCCTTAATAGCTTTTTTACTTTCGTTGGCAGGCCTATCATCATCGACAGTGGGAGCTGCTGCGCCCAATAC
GCTTTACTTGATTGCCAATAACCAGGCAACGTTGGAAAGTGAAACAACGGCAAAACCAAAAATTTATTTGATATCCAGTT
CATCACAATACGATGAAAACACGATAGGAGAGATTAAGGCGGTCTTTCAGCAACAAGGCTATTCTGTGGATAGCCGTTAC
CTTGATCAGCAACCAACGCCGTTGGGATACGTCAACACGGACGAGGTGCGTGCGGAAACGCTAATCAATGCGCTAACGGA
TGAGAATGTCAAGTATCTTTGGTTTGTCAGGGGAGGTTCGGGCGCTCTGAACCTCTATCCCTATTTATATCGTAATCGGG
ATAAAATCGCTGCCGCTTCCCCTAAAATTCTCATCGGGTTTAGCGATGTCACAGCCCTTCACCATTTTATCAATAATGTT
ATCAAATGGCCCAGTATCCACGGTATTCTAGCTTCCTTTAATAGTGAAATGTATGAGGTGGATAAGACTGAACAAATAAG
CATGTATAGCGGTATACAGCAGGTTTTTCGGACCATCACGAATGGCATGACCTACACGGGGATCGAACCGCTCAATGTGT
CCGCCCGGGCAGGCGGGCAAGGAACTTTAAACGGCGGCAATCTGACGTTAGTTCAATCGTTATTTTCAACCCGCTATGAG
AAAAACTATGCCGATAAGGTTATGCTTATGGAGGATACCGGCGTCACTTATAAGCAACTTGACAGGACGCTCCATCAGCT
TGAGTATAAGAAAAACTTTCATCCTAAAGCGGTTATCTTTGGGCAATTCTATAGTATCAATGCGAATAAAATTGAGAAAG
ATCTTTACCGTTATGTGCTGCAGGAATTTGCCAACCGGGTGGATTATCCAGTTTACTATTATCCCGAATTCGGCCACGGT
AAAACTAACCAGCCTTTTATACTGGGTCAACAAATGCAAATTTTATGCAATGAACATTACCGTTATTGCAGTCTGACCCA
GCCGCCTGTGAAAAGATAG

Upstream 100 bases:

>100_bases
AAACGTCAAATAAACGTCATTCTGGTTTTGAGGGTCGTTCGCGCTTCTGCATGTTAATTAGATAGGCAGGTCATCGTGAC
CGGTCATCGCGGAGCACTAT

Downstream 100 bases:

>100_bases
CCAGTAATCCGACGATTCGCTCATGCCGCTGGGACAGCCCTGAAGCGGCACACTTAAGATATAAAGCATTGCCGGGGTGT
TTAGATATTCCACCTACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKYPLIAFLLSLAGLSSSTVGAAAPNTLYLIANNQATLESETTAKPKIYLISSSSQYDENTIGEIKAVFQQQGYSVDSRY
LDQQPTPLGYVNTDEVRAETLINALTDENVKYLWFVRGGSGALNLYPYLYRNRDKIAAASPKILIGFSDVTALHHFINNV
IKWPSIHGILASFNSEMYEVDKTEQISMYSGIQQVFRTITNGMTYTGIEPLNVSARAGGQGTLNGGNLTLVQSLFSTRYE
KNYADKVMLMEDTGVTYKQLDRTLHQLEYKKNFHPKAVIFGQFYSINANKIEKDLYRYVLQEFANRVDYPVYYYPEFGHG
KTNQPFILGQQMQILCNEHYRYCSLTQPPVKR

Sequences:

>Translated_352_residues
MKYPLIAFLLSLAGLSSSTVGAAAPNTLYLIANNQATLESETTAKPKIYLISSSSQYDENTIGEIKAVFQQQGYSVDSRY
LDQQPTPLGYVNTDEVRAETLINALTDENVKYLWFVRGGSGALNLYPYLYRNRDKIAAASPKILIGFSDVTALHHFINNV
IKWPSIHGILASFNSEMYEVDKTEQISMYSGIQQVFRTITNGMTYTGIEPLNVSARAGGQGTLNGGNLTLVQSLFSTRYE
KNYADKVMLMEDTGVTYKQLDRTLHQLEYKKNFHPKAVIFGQFYSINANKIEKDLYRYVLQEFANRVDYPVYYYPEFGHG
KTNQPFILGQQMQILCNEHYRYCSLTQPPVKR
>Mature_352_residues
MKYPLIAFLLSLAGLSSSTVGAAAPNTLYLIANNQATLESETTAKPKIYLISSSSQYDENTIGEIKAVFQQQGYSVDSRY
LDQQPTPLGYVNTDEVRAETLINALTDENVKYLWFVRGGSGALNLYPYLYRNRDKIAAASPKILIGFSDVTALHHFINNV
IKWPSIHGILASFNSEMYEVDKTEQISMYSGIQQVFRTITNGMTYTGIEPLNVSARAGGQGTLNGGNLTLVQSLFSTRYE
KNYADKVMLMEDTGVTYKQLDRTLHQLEYKKNFHPKAVIFGQFYSINANKIEKDLYRYVLQEFANRVDYPVYYYPEFGHG
KTNQPFILGQQMQILCNEHYRYCSLTQPPVKR

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 39896; Mature: 39896

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYPLIAFLLSLAGLSSSTVGAAAPNTLYLIANNQATLESETTAKPKIYLISSSSQYDEN
CCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCEEEEEECCCCCCCH
TIGEIKAVFQQQGYSVDSRYLDQQPTPLGYVNTDEVRAETLINALTDENVKYLWFVRGGS
HHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCC
GALNLYPYLYRNRDKIAAASPKILIGFSDVTALHHFINNVIKWPSIHGILASFNSEMYEV
CCEEECHHHHCCCCCEECCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHEEC
DKTEQISMYSGIQQVFRTITNGMTYTGIEPLNVSARAGGQGTLNGGNLTLVQSLFSTRYE
CCCHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHH
KNYADKVMLMEDTGVTYKQLDRTLHQLEYKKNFHPKAVIFGQFYSINANKIEKDLYRYVL
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHH
QEFANRVDYPVYYYPEFGHGKTNQPFILGQQMQILCNEHYRYCSLTQPPVKR
HHHHHHCCCCEEECCCCCCCCCCCCEEECHHHHHHHHCCCCEECCCCCCCCC
>Mature Secondary Structure
MKYPLIAFLLSLAGLSSSTVGAAAPNTLYLIANNQATLESETTAKPKIYLISSSSQYDEN
CCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCEEEEEECCCCCCCH
TIGEIKAVFQQQGYSVDSRYLDQQPTPLGYVNTDEVRAETLINALTDENVKYLWFVRGGS
HHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCC
GALNLYPYLYRNRDKIAAASPKILIGFSDVTALHHFINNVIKWPSIHGILASFNSEMYEV
CCEEECHHHHCCCCCEECCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHEEC
DKTEQISMYSGIQQVFRTITNGMTYTGIEPLNVSARAGGQGTLNGGNLTLVQSLFSTRYE
CCCHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHH
KNYADKVMLMEDTGVTYKQLDRTLHQLEYKKNFHPKAVIFGQFYSINANKIEKDLYRYVL
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHH
QEFANRVDYPVYYYPEFGHGKTNQPFILGQQMQILCNEHYRYCSLTQPPVKR
HHHHHHCCCCEEECCCCCCCCCCCCEEECHHHHHHHHCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]