| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is 85059501
Identifier: 85059501
GI number: 85059501
Start: 2579624
End: 2580013
Strand: Reverse
Name: 85059501
Synonym: SG1523
Alternate gene names: NA
Gene position: 2580013-2579624 (Counterclockwise)
Preceding gene: 85059505
Following gene: 85059500
Centisome position: 61.85
GC content: 63.08
Gene sequence:
>390_bases GTGACATTGTCATGCCTTCCGGCAGACGGTCGGGCCGCCGAGCGTCAACGAGGCAAAGACCTCGCTCCCGGCGTTAAACA GCGGCACGCTCAGACCGGTTACGTTCTCCAGGCGTTCGCCGCGCGACAGCCACCAACCCTCGCGTCGAATAAAGTCCAGG GCGTCACGCAGCCGCGGTTGGGCGGCGAGCGGCGTAGACTGCTCAATCAAGCGCGCACGCTCTCCGCCACCTGCACGCAC AGCGCCTGTTCATTATCCAGTACGGTAAACCAGTCGGTTTCGCCGCTAACGTCCGCCAACGCACGGAGTTCGCGGGCGAT AATATCGTCCAGGCGCAGCCGTGAGCGGAAAATCTGGCCGTATTCCCAAAACCGTGCCCCCGGTTCGTAA
Upstream 100 bases:
>100_bases TATAAGCGGCCGATAACGTCATCTTGTCTGTCATATCATCCATTGAGAGTGTGCCAGCTCGCGGCAATGGCGCGGCGGGC GGTAAGCAGATGAGGAAGAT
Downstream 100 bases:
>100_bases CGCTTGCTATGCAGACACTGTTGCAAAAACCGCCGTTGCGAAAGGTTGCCAGCGCCCGCTGCACCACGGAGGGGGACAGT CCGCTGTACTGACTCAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTLSCLPADGRAAERQRGKDLAPGVKQRHAQTGYVLQAFAARQPPTLASNKVQGVTQPRLGGERRRLLNQARTLSATCTH SACSLSSTVNQSVSPLTSANARSSRAIISSRRSRERKIWPYSQNRAPGS
Sequences:
>Translated_129_residues MTLSCLPADGRAAERQRGKDLAPGVKQRHAQTGYVLQAFAARQPPTLASNKVQGVTQPRLGGERRRLLNQARTLSATCTH SACSLSSTVNQSVSPLTSANARSSRAIISSRRSRERKIWPYSQNRAPGS >Mature_128_residues TLSCLPADGRAAERQRGKDLAPGVKQRHAQTGYVLQAFAARQPPTLASNKVQGVTQPRLGGERRRLLNQARTLSATCTHS ACSLSSTVNQSVSPLTSANARSSRAIISSRRSRERKIWPYSQNRAPGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13970; Mature: 13839
Theoretical pI: Translated: 12.25; Mature: 12.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSCLPADGRAAERQRGKDLAPGVKQRHAQTGYVLQAFAARQPPTLASNKVQGVTQPRL CCCCCCCCCCCHHHHHCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC GGERRRLLNQARTLSATCTHSACSLSSTVNQSVSPLTSANARSSRAIISSRRSRERKIWP CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCC YSQNRAPGS CCCCCCCCC >Mature Secondary Structure TLSCLPADGRAAERQRGKDLAPGVKQRHAQTGYVLQAFAARQPPTLASNKVQGVTQPRL CCCCCCCCCCHHHHHCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC GGERRRLLNQARTLSATCTHSACSLSSTVNQSVSPLTSANARSSRAIISSRRSRERKIWP CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCC YSQNRAPGS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA