| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059468
Identifier: 85059468
GI number: 85059468
Start: 2486621
End: 2487043
Strand: Reverse
Name: 85059468
Synonym: SG1490
Alternate gene names: NA
Gene position: 2487043-2486621 (Counterclockwise)
Preceding gene: 162382791
Following gene: 85059466
Centisome position: 59.62
GC content: 53.19
Gene sequence:
>423_bases ATGAGCAAACCTCAGTTTGCAACTGCCGAACAGGGCGAAGCCTTTTGCTTCGATTACACGGATTATCTTTCTGCGAGCTG TAAGAAACGCTGGAGTTTTATCGATGCGATCTACGGTGTCATTCCCATTTTCGGCATGGTGACCCGCAAGGCTGCCGCAA GCGAGACCGATCAGGAAAAGCTGAAAGCGCTGGCGTTGCAGGTTCTTTCAACCCAGGTGAATGACGAAACGAATATCATA CGTCTGATTACCCTCGCCGGACAGCAGGGGCTGACTCGTTTCGATATTAAATTGCCCTACGCCCTGGAAGGGGAGCAACT GACCCATATTTGCCAGGAAGTGGGGCAACCTTTGCAACTGACCCAGCAGGATGAGCGGCTGCTCATCCTCTTACCTGACC ACAGCACCGCCCCCTGCGTCTGA
Upstream 100 bases:
>100_bases TTGCCCGGCGGCTGAGCACCTTTTGTTCCCGCCGGTATGGTATAGTGCGGGTCGGGTGGAAGGCGAGCGGCGTCAAACGG TTTAGAGAGGAAAGGGCGAG
Downstream 100 bases:
>100_bases ATCGCCCCGCCTGCCGCCGCCGTGCCTCTGCGTCCTAAACGCAGGACGCCAGGCGCAATACCCTCCCGGCGCAGAGTAGC GCGTGAAAACCCTATTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSKPQFATAEQGEAFCFDYTDYLSASCKKRWSFIDAIYGVIPIFGMVTRKAAASETDQEKLKALALQVLSTQVNDETNII RLITLAGQQGLTRFDIKLPYALEGEQLTHICQEVGQPLQLTQQDERLLILLPDHSTAPCV
Sequences:
>Translated_140_residues MSKPQFATAEQGEAFCFDYTDYLSASCKKRWSFIDAIYGVIPIFGMVTRKAAASETDQEKLKALALQVLSTQVNDETNII RLITLAGQQGLTRFDIKLPYALEGEQLTHICQEVGQPLQLTQQDERLLILLPDHSTAPCV >Mature_139_residues SKPQFATAEQGEAFCFDYTDYLSASCKKRWSFIDAIYGVIPIFGMVTRKAAASETDQEKLKALALQVLSTQVNDETNIIR LITLAGQQGLTRFDIKLPYALEGEQLTHICQEVGQPLQLTQQDERLLILLPDHSTAPCV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15622; Mature: 15491
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPQFATAEQGEAFCFDYTDYLSASCKKRWSFIDAIYGVIPIFGMVTRKAAASETDQEK CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LKALALQVLSTQVNDETNIIRLITLAGQQGLTRFDIKLPYALEGEQLTHICQEVGQPLQL HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCEECCHHHHHHHHHHCCCCEE TQQDERLLILLPDHSTAPCV CCCCCEEEEEECCCCCCCCC >Mature Secondary Structure SKPQFATAEQGEAFCFDYTDYLSASCKKRWSFIDAIYGVIPIFGMVTRKAAASETDQEK CCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LKALALQVLSTQVNDETNIIRLITLAGQQGLTRFDIKLPYALEGEQLTHICQEVGQPLQL HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCEECCHHHHHHHHHHCCCCEE TQQDERLLILLPDHSTAPCV CCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA