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The map label for this gene is yfaD [C]

Identifier: 85059374

GI number: 85059374

Start: 2317229

End: 2318209

Strand: Reverse

Name: yfaD [C]

Synonym: SG1396

Alternate gene names: 85059374

Gene position: 2318209-2317229 (Counterclockwise)

Preceding gene: 85059375

Following gene: 85059362

Centisome position: 55.58

GC content: 52.19

Gene sequence:

>981_bases
ATGGAATACCGCAATCTGAACAAGCTATATACTACACCGATGACAAAATCCTCACTCTCACAACACGACGCCCTGTTCAA
AAAATTCCTCGGCGACATTGCTGTAGCTCGTGACTTTCTGGAAGTGCATCTGCCGCCGCATCTGCGTGAGCGCTGCGATT
TCAGCACCATGGCAATGGAGTCCGGCAGCTTTATCGAAGACGACCTCAGGGGCCAGTGCTCGGATATGCTCTATTCGATG
AAGACCACGACGGGCCATGATGGCTACGTCTACTGTCTGATTGAATACCAGAGCCGACCGGAAAAGCTGATGGCGTTTCG
GTTGCTACGGTATGCGGTCGCCGCGATGCAACGGCATCTTGAACAAGGCAATGACGCTTTGCCGGTGGTGATACCGCTTC
TGTTCTACCACGGCACTACATCGCCCTATCCCTACAGCACCCAATGGCTCGATTGCTTTACTGACCCCGAACTGGCAGAA
TTAGTCTACAGGCAAGCATTCCCGCTGGTTGACATCACGGCTATGCTGGATGATGAAATACTGTCCCATCGGCGGGTGGC
TCTGCTGGAATTGGTGCAGAAGCACATCCGGACCCGTGATATGTTAGAAATAGCCGCTGATATCGCCCGTCTGCTCAATC
TATGGGCAATACCGAAAGAACAGTTCCGTAGCCTGATGTACTATATTGCAGAGCGGGGAAATACTTCGGATGAATCGGAA
TTCCTACAGCATATTGCCGCCAAAGCCACTGACTACCGGGAGGACATCATGACCATTGCAGAGCAGCTTGAAGCTAAGGG
CATCCAACTCGGGCGTCAAGAAGGTATCCAGCTTGGCGAGCAGAAAGGCCGGCAGGAAGGCGAAAAGCTGGCCTCACTCA
AGATTGCCCGGCAGCTGTTGGCTAACGGTGCTGAGCGAAATCTTATCAAAATCGCTACTGGCCTATCTGACCATGAGTTG
AATGATTTGGTGAGTCAGTAG

Upstream 100 bases:

>100_bases
ATGCTCACCGATACGCTCCCGCTGGCATAAATCCGAGCTCGGCCAGTTCGCACAGAGGCACTGACAGCTGCCCCGGCTCG
TTGAGGGGCCGGGGATTTCG

Downstream 100 bases:

>100_bases
TTTTCTTTTCGTTAATCTTAACCATCGATAACAGTTTCGGTTCAAGGTCGTAATTGTGGGATGTGACACTTAGCTGTGTC
AACACGGAGTTGACATGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MEYRNLNKLYTTPMTKSSLSQHDALFKKFLGDIAVARDFLEVHLPPHLRERCDFSTMAMESGSFIEDDLRGQCSDMLYSM
KTTTGHDGYVYCLIEYQSRPEKLMAFRLLRYAVAAMQRHLEQGNDALPVVIPLLFYHGTTSPYPYSTQWLDCFTDPELAE
LVYRQAFPLVDITAMLDDEILSHRRVALLELVQKHIRTRDMLEIAADIARLLNLWAIPKEQFRSLMYYIAERGNTSDESE
FLQHIAAKATDYREDIMTIAEQLEAKGIQLGRQEGIQLGEQKGRQEGEKLASLKIARQLLANGAERNLIKIATGLSDHEL
NDLVSQ

Sequences:

>Translated_326_residues
MEYRNLNKLYTTPMTKSSLSQHDALFKKFLGDIAVARDFLEVHLPPHLRERCDFSTMAMESGSFIEDDLRGQCSDMLYSM
KTTTGHDGYVYCLIEYQSRPEKLMAFRLLRYAVAAMQRHLEQGNDALPVVIPLLFYHGTTSPYPYSTQWLDCFTDPELAE
LVYRQAFPLVDITAMLDDEILSHRRVALLELVQKHIRTRDMLEIAADIARLLNLWAIPKEQFRSLMYYIAERGNTSDESE
FLQHIAAKATDYREDIMTIAEQLEAKGIQLGRQEGIQLGEQKGRQEGEKLASLKIARQLLANGAERNLIKIATGLSDHEL
NDLVSQ
>Mature_326_residues
MEYRNLNKLYTTPMTKSSLSQHDALFKKFLGDIAVARDFLEVHLPPHLRERCDFSTMAMESGSFIEDDLRGQCSDMLYSM
KTTTGHDGYVYCLIEYQSRPEKLMAFRLLRYAVAAMQRHLEQGNDALPVVIPLLFYHGTTSPYPYSTQWLDCFTDPELAE
LVYRQAFPLVDITAMLDDEILSHRRVALLELVQKHIRTRDMLEIAADIARLLNLWAIPKEQFRSLMYYIAERGNTSDESE
FLQHIAAKATDYREDIMTIAEQLEAKGIQLGRQEGIQLGEQKGRQEGEKLASLKIARQLLANGAERNLIKIATGLSDHEL
NDLVSQ

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1788577, Length=310, Percent_Identity=49.0322580645161, Blast_Score=288, Evalue=3e-79,
Organism=Escherichia coli, GI1789816, Length=305, Percent_Identity=48.1967213114754, Blast_Score=284, Evalue=6e-78,
Organism=Escherichia coli, GI1788643, Length=314, Percent_Identity=45.2229299363057, Blast_Score=274, Evalue=7e-75,
Organism=Escherichia coli, GI1786324, Length=299, Percent_Identity=45.4849498327759, Blast_Score=262, Evalue=3e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 37353; Mature: 37353

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYRNLNKLYTTPMTKSSLSQHDALFKKFLGDIAVARDFLEVHLPPHLRERCDFSTMAME
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHC
SGSFIEDDLRGQCSDMLYSMKTTTGHDGYVYCLIEYQSRPEKLMAFRLLRYAVAAMQRHL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
EQGNDALPVVIPLLFYHGTTSPYPYSTQWLDCFTDPELAELVYRQAFPLVDITAMLDDEI
HCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH
LSHRRVALLELVQKHIRTRDMLEIAADIARLLNLWAIPKEQFRSLMYYIAERGNTSDESE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH
FLQHIAAKATDYREDIMTIAEQLEAKGIQLGRQEGIQLGEQKGRQEGEKLASLKIARQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANGAERNLIKIATGLSDHELNDLVSQ
HCCCCCCHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MEYRNLNKLYTTPMTKSSLSQHDALFKKFLGDIAVARDFLEVHLPPHLRERCDFSTMAME
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHC
SGSFIEDDLRGQCSDMLYSMKTTTGHDGYVYCLIEYQSRPEKLMAFRLLRYAVAAMQRHL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
EQGNDALPVVIPLLFYHGTTSPYPYSTQWLDCFTDPELAELVYRQAFPLVDITAMLDDEI
HCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH
LSHRRVALLELVQKHIRTRDMLEIAADIARLLNLWAIPKEQFRSLMYYIAERGNTSDESE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH
FLQHIAAKATDYREDIMTIAEQLEAKGIQLGRQEGIQLGEQKGRQEGEKLASLKIARQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANGAERNLIKIATGLSDHELNDLVSQ
HCCCCCCHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]