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The map label for this gene is ychJ [C]

Identifier: 85059343

GI number: 85059343

Start: 2266787

End: 2267251

Strand: Reverse

Name: ychJ [C]

Synonym: SG1365

Alternate gene names: 85059343

Gene position: 2267251-2266787 (Counterclockwise)

Preceding gene: 85059348

Following gene: 85059342

Centisome position: 54.36

GC content: 57.42

Gene sequence:

>465_bases
GTGCGCTCACCTTGTCCCTGCAATAGCGGTAAGCTTTATGCCGATTGCTGCGCCCCGTTTATTAGCAAAGACGCCCTTCC
CGCAACGCCTGAACAATTAATGCGGTCGCGCTACAGCGCCTTTGTTATTCAGGATGGGGATTATTTGATTGCCACCTGGC
ACCCACAAGCCGTCGCCGAGGCGTGGCGCGATGAGATCACAGCCGGCTTTCGTACTACCCGCTGGCGCGACCTGGCGGTG
CAGGAATGCGCCGCCGGCCAGGATAGCGATTCCGGCTATGTGACCTTTCTGGCGCTCTTCTACGACGAGCGTCAGCGGCG
CAATGGTTTTATTCATGAACGCTCACGCTTTGTCCGCCTCAACGAACGCTGGTATTATGTCGACGGCCGGCATATCGTAC
CCGGCAGAAACGCGCCGTGCCCGTGCGGCTCCGGCCTTAAGTACAAAAAGTGTTGTGAACAATAA

Upstream 100 bases:

>100_bases
GCAAAAAAGTCGCTCCCGCCGTCAATGCGGGTAAAATACCTTTTTTTGTGTATGTGCCAGCCGTATCACGTCTTGACACC
GCCACTAATCCGGGAGTACC

Downstream 100 bases:

>100_bases
TCCGGCCGGTGTTTGCTCGCGGCCCGCTTCATGGCAAAAACTCACAGACAGGACAGGATCCGCAAGTCAATGCAGTCGCA
AAATGTACAACGAAAAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRSPCPCNSGKLYADCCAPFISKDALPATPEQLMRSRYSAFVIQDGDYLIATWHPQAVAEAWRDEITAGFRTTRWRDLAV
QECAAGQDSDSGYVTFLALFYDERQRRNGFIHERSRFVRLNERWYYVDGRHIVPGRNAPCPCGSGLKYKKCCEQ

Sequences:

>Translated_154_residues
MRSPCPCNSGKLYADCCAPFISKDALPATPEQLMRSRYSAFVIQDGDYLIATWHPQAVAEAWRDEITAGFRTTRWRDLAV
QECAAGQDSDSGYVTFLALFYDERQRRNGFIHERSRFVRLNERWYYVDGRHIVPGRNAPCPCGSGLKYKKCCEQ
>Mature_154_residues
MRSPCPCNSGKLYADCCAPFISKDALPATPEQLMRSRYSAFVIQDGDYLIATWHPQAVAEAWRDEITAGFRTTRWRDLAV
QECAAGQDSDSGYVTFLALFYDERQRRNGFIHERSRFVRLNERWYYVDGRHIVPGRNAPCPCGSGLKYKKCCEQ

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family

Homologues:

Organism=Escherichia coli, GI1787484, Length=155, Percent_Identity=51.6129032258064, Blast_Score=153, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1365_SODGM (Q2NT85)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_455045.1
- ProteinModelPortal:   Q2NT85
- SMR:   Q2NT85
- STRING:   Q2NT85
- GeneID:   3867337
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG1365
- NMPDR:   fig|343509.6.peg.2791
- eggNOG:   COG3012
- HOGENOM:   HBG609508
- OMA:   FTARWHD
- PhylomeDB:   Q2NT85
- BioCyc:   SGLO343509:SG1365-MONOMER
- HAMAP:   MF_00612
- InterPro:   IPR004027
- InterPro:   IPR023006

Pfam domain/function: PF02810 SEC-C

EC number: NA

Molecular weight: Translated: 17670; Mature: 17670

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPCPCNSGKLYADCCAPFISKDALPATPEQLMRSRYSAFVIQDGDYLIATWHPQAVAE
CCCCCCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHCEEEEECCCEEEEEECHHHHHH
AWRDEITAGFRTTRWRDLAVQECAAGQDSDSGYVTFLALFYDERQRRNGFIHERSRFVRL
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEE
NERWYYVDGRHIVPGRNAPCPCGSGLKYKKCCEQ
CCEEEEECCEEECCCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MRSPCPCNSGKLYADCCAPFISKDALPATPEQLMRSRYSAFVIQDGDYLIATWHPQAVAE
CCCCCCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHCEEEEECCCEEEEEECHHHHHH
AWRDEITAGFRTTRWRDLAVQECAAGQDSDSGYVTFLALFYDERQRRNGFIHERSRFVRL
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEE
NERWYYVDGRHIVPGRNAPCPCGSGLKYKKCCEQ
CCEEEEECCEEECCCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA