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The map label for this gene is yobD [C]

Identifier: 85059302

GI number: 85059302

Start: 2203188

End: 2203649

Strand: Reverse

Name: yobD [C]

Synonym: SG1324

Alternate gene names: 85059302

Gene position: 2203649-2203188 (Counterclockwise)

Preceding gene: 85059303

Following gene: 85059301

Centisome position: 52.83

GC content: 41.13

Gene sequence:

>462_bases
ATGACCGTTACCGATATCGGCCTGGTAATAATGATTGTTATCGCATTGCTGTTTGCCGTCTTTGATGAGTTCATTGTAGA
TTACGCGCTGCGCGGTAAGACGCGGCTACGAGTACCGTTGCGCCGTCAGGGGCGCTTGGATGGGCTGATTTTTATCGTCT
TGCTGCTTATCCTGCTGTACAAGAATATCACCACCGACGGCAAGGTAATGACCTCTACCCTGATTTTATTTCTGGGATTG
ATGGTGATCTATCTGGCCTATATTCGCTGCCCTCGAATGCTTTTCAAAACCGAAGGTTTTTTTTACGGCAATGTTTTTAT
TAATTATTCCCGCATCAAAAACATGAATTTATCAGAAGATGGTTATCTGGTCATTGATTTGGAAAAAAGAAGTTTGTTGA
TACAGGTCAATAAATTAGATGACTTACAGAAAATCTATCACTTACTCATTGAAATACAGTAG

Upstream 100 bases:

>100_bases
TCGGTATTGTCGGCTACTGGACCGGTTTACTGGGCCTGTAAGCGTATTCTTACCAAACAGGGGGATGTTGCCCCGATTTT
TTTGCTTTTTTGGGGAAAGC

Downstream 100 bases:

>100_bases
GTTAAAATTATTTATAGCCTTGACTAAATAAATTAGTTACCACCATTAAAAATACCCTATTCATTAATTACGCCGTTACA
CGCCGACATATCTTGGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTVTDIGLVIMIVIALLFAVFDEFIVDYALRGKTRLRVPLRRQGRLDGLIFIVLLLILLYKNITTDGKVMTSTLILFLGL
MVIYLAYIRCPRMLFKTEGFFYGNVFINYSRIKNMNLSEDGYLVIDLEKRSLLIQVNKLDDLQKIYHLLIEIQ

Sequences:

>Translated_153_residues
MTVTDIGLVIMIVIALLFAVFDEFIVDYALRGKTRLRVPLRRQGRLDGLIFIVLLLILLYKNITTDGKVMTSTLILFLGL
MVIYLAYIRCPRMLFKTEGFFYGNVFINYSRIKNMNLSEDGYLVIDLEKRSLLIQVNKLDDLQKIYHLLIEIQ
>Mature_152_residues
TVTDIGLVIMIVIALLFAVFDEFIVDYALRGKTRLRVPLRRQGRLDGLIFIVLLLILLYKNITTDGKVMTSTLILFLGLM
VIYLAYIRCPRMLFKTEGFFYGNVFINYSRIKNMNLSEDGYLVIDLEKRSLLIQVNKLDDLQKIYHLLIEIQ

Specific function: Unknown

COG id: COG4811

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0266 family

Homologues:

Organism=Escherichia coli, GI1788123, Length=153, Percent_Identity=50.3267973856209, Blast_Score=155, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1324_SODGM (Q2NTC6)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_455004.1
- STRING:   Q2NTC6
- GeneID:   3867519
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG1324
- eggNOG:   COG4811
- HOGENOM:   HBG391110
- OMA:   RVRNIDN
- PhylomeDB:   Q2NTC6
- ProtClustDB:   PRK02913
- BioCyc:   SGLO343509:SG1324-MONOMER
- HAMAP:   MF_01071
- InterPro:   IPR009328
- PIRSF:   PIRSF020687
- ProDom:   PD091196

Pfam domain/function: PF06173 DUF986

EC number: NA

Molecular weight: Translated: 17799; Mature: 17668

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe0b931c)-; HASH(0xf08fd78)-; HASH(0xec88dc4)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTDIGLVIMIVIALLFAVFDEFIVDYALRGKTRLRVPLRRQGRLDGLIFIVLLLILLY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHH
KNITTDGKVMTSTLILFLGLMVIYLAYIRCPRMLFKTEGFFYGNVFINYSRIKNMNLSED
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHCCCCCCCC
GYLVIDLEKRSLLIQVNKLDDLQKIYHLLIEIQ
CEEEEEECCCEEEEEECCHHHHHHHHHHHHCCH
>Mature Secondary Structure 
TVTDIGLVIMIVIALLFAVFDEFIVDYALRGKTRLRVPLRRQGRLDGLIFIVLLLILLY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHH
KNITTDGKVMTSTLILFLGLMVIYLAYIRCPRMLFKTEGFFYGNVFINYSRIKNMNLSED
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHCCCCCCCC
GYLVIDLEKRSLLIQVNKLDDLQKIYHLLIEIQ
CEEEEEECCCEEEEEECCHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA