Click here to switch to the map view.

The map label for this gene is yebN [C]

Identifier: 85059301

GI number: 85059301

Start: 2202218

End: 2202805

Strand: Reverse

Name: yebN [C]

Synonym: SG1323

Alternate gene names: 85059301

Gene position: 2202805-2202218 (Counterclockwise)

Preceding gene: 85059302

Following gene: 85059299

Centisome position: 52.81

GC content: 57.65

Gene sequence:

>588_bases
ATGAACCTTTCCGCCACACTGATTCTTGCCTTTGGCATGTCGATGGATGCCTTTGCCGCCTCCGTTGGCAAAGGCGCCAC
GCTGCACAAGCCCGCGCTACGAGAAGCGCTGCGCACCGGACTGATTTTCGGCGTAATAGAAGCCATCACCCCGCTTATCG
GCTGGGGGCTTGGTTTGCTGTCCAGCCAATATATTATGCGTTGGGATCACTGGGTGGCGTTTACCCTGTTGGCGTTTCTG
GGCGGTCGGATGGTTCTGGCGGGCTGGAAACAGCAGCCGTTAGAGACGTCGCTGGTCGGCAAGCATAGTCTAGGCGTGCT
GATCGCTACCGCCATCGCGACCAGCCTTGATGCACTGGCCATCGGTGTGGGTTTGGCGATGCTGCAAGTCAATATCCTCC
ACGCCGCGCTGCTTATCGGTCTCGCCACCTTGATTATGTCCACCATCGGCATGCTGCTGGGACGTTTTGTCGGCCCTTGT
CTGGGCAGTAAAGCGGAAATCATCGGCGGCCTGATTCTCATCGGCATCGGCTGTAACATACTTTACAGCCATATCGGCGA
GGCTATGCTCGCCCATCTGCCCGGTTAA

Upstream 100 bases:

>100_bases
GGGCGGCCTTCATCGGCTGGTAAGACTATAGACTGCGGACCTGTCGGTAAGGTTGGGGGACGGGAAAGCGTGGATATGGG
CGCTCAGCCGAGACAGAATA

Downstream 100 bases:

>100_bases
GTCCGCCCTGCTCCCGCCGCATCGCCCAGACGTCAGGCACGCCGCCACAGGCGCACGATAAAATCCGTTTCGCAGTCGAA
CCGGGGCATGGCCGCCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNLSATLILAFGMSMDAFAASVGKGATLHKPALREALRTGLIFGVIEAITPLIGWGLGLLSSQYIMRWDHWVAFTLLAFL
GGRMVLAGWKQQPLETSLVGKHSLGVLIATAIATSLDALAIGVGLAMLQVNILHAALLIGLATLIMSTIGMLLGRFVGPC
LGSKAEIIGGLILIGIGCNILYSHIGEAMLAHLPG

Sequences:

>Translated_195_residues
MNLSATLILAFGMSMDAFAASVGKGATLHKPALREALRTGLIFGVIEAITPLIGWGLGLLSSQYIMRWDHWVAFTLLAFL
GGRMVLAGWKQQPLETSLVGKHSLGVLIATAIATSLDALAIGVGLAMLQVNILHAALLIGLATLIMSTIGMLLGRFVGPC
LGSKAEIIGGLILIGIGCNILYSHIGEAMLAHLPG
>Mature_195_residues
MNLSATLILAFGMSMDAFAASVGKGATLHKPALREALRTGLIFGVIEAITPLIGWGLGLLSSQYIMRWDHWVAFTLLAFL
GGRMVLAGWKQQPLETSLVGKHSLGVLIATAIATSLDALAIGVGLAMLQVNILHAALLIGLATLIMSTIGMLLGRFVGPC
LGSKAEIIGGLILIGIGCNILYSHIGEAMLAHLPG

Specific function: Unknown

COG id: COG1971

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0059 family

Homologues:

Organism=Escherichia coli, GI87081981, Length=185, Percent_Identity=63.2432432432432, Blast_Score=240, Evalue=5e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1323_SODGM (Q2NTC7)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_455003.1
- STRING:   Q2NTC7
- GeneID:   3867518
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG1323
- NMPDR:   fig|343509.6.peg.2713
- eggNOG:   COG1971
- HOGENOM:   HBG709685
- OMA:   WDHWVAF
- PhylomeDB:   Q2NTC7
- BioCyc:   SGLO343509:SG1323-MONOMER
- HAMAP:   MF_01521
- InterPro:   IPR003810
- InterPro:   IPR022929

Pfam domain/function: PF02659 DUF204

EC number: NA

Molecular weight: Translated: 20323; Mature: 20323

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf494694)-; HASH(0xe9a06fc)-; HASH(0xea595ac)-; HASH(0xaf45634)-; HASH(0xf373fd8)-; HASH(0xe97450c)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSATLILAFGMSMDAFAASVGKGATLHKPALREALRTGLIFGVIEAITPLIGWGLGLL
CCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSQYIMRWDHWVAFTLLAFLGGRMVLAGWKQQPLETSLVGKHSLGVLIATAIATSLDALA
HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHH
IGVGLAMLQVNILHAALLIGLATLIMSTIGMLLGRFVGPCLGSKAEIIGGLILIGIGCNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LYSHIGEAMLAHLPG
HHHHHHHHHHHHCCH
>Mature Secondary Structure
MNLSATLILAFGMSMDAFAASVGKGATLHKPALREALRTGLIFGVIEAITPLIGWGLGLL
CCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSQYIMRWDHWVAFTLLAFLGGRMVLAGWKQQPLETSLVGKHSLGVLIATAIATSLDALA
HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHH
IGVGLAMLQVNILHAALLIGLATLIMSTIGMLLGRFVGPCLGSKAEIIGGLILIGIGCNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LYSHIGEAMLAHLPG
HHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA