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The map label for this gene is bssS

Identifier: 85059027

GI number: 85059027

Start: 1751098

End: 1751346

Strand: Reverse

Name: bssS

Synonym: SG1049

Alternate gene names: 85059027

Gene position: 1751346-1751098 (Counterclockwise)

Preceding gene: 85059028

Following gene: 85059025

Centisome position: 41.99

GC content: 49.0

Gene sequence:

>249_bases
ATGTACAGAAAAAACGAAATCATTCATACACACCCGCTGGTCGGCTGGGATATCAGTACAGTAGATCCCTACGATGCCAT
GATGATTCGCCTGCATTATGTCAATTCCCCTGACCAGGCCACTGCTGATGCGGAAGTTGACCGGACTTTGTGGCTGACGA
CCGATGTTGCCAAGCAGCTGATTTCCATCCTTGAAGCCGGTATCGCCAAAATAGAATCAACGGAACACCTGGATTACCGC
AAGCATTAG

Upstream 100 bases:

>100_bases
AAAAATTTGAAAAGTCGGGTATAATGAAGCTACCTGCAAACCAGGAGATGCCAGAACCTCATTGTCACTCAAATCATAAC
GAGTCAAATAAGGGGTATAT

Downstream 100 bases:

>100_bases
TTCTGTCACCCCTCATGCGCCCGCAGCTCTGCCGCGGGTGTTTTTATTTTGCGTTGGCCCTATTTCAGACAGATGACCCT
ATTCGTGCTTACAGATTGTC

Product: biofilm formation regulatory protein BssS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MYRKNEIIHTHPLVGWDISTVDPYDAMMIRLHYVNSPDQATADAEVDRTLWLTTDVAKQLISILEAGIAKIESTEHLDYR
KH

Sequences:

>Translated_82_residues
MYRKNEIIHTHPLVGWDISTVDPYDAMMIRLHYVNSPDQATADAEVDRTLWLTTDVAKQLISILEAGIAKIESTEHLDYR
KH
>Mature_82_residues
MYRKNEIIHTHPLVGWDISTVDPYDAMMIRLHYVNSPDQATADAEVDRTLWLTTDVAKQLISILEAGIAKIESTEHLDYR
KH

Specific function: Represses biofilm formation in M9C glu and LB glu media but not in M9C and LB media. Seems to act as a global regulator of several genes involved in catabolite repression and stress response and regulation of the uptake and export of signaling pathways. C

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787299, Length=84, Percent_Identity=63.0952380952381, Blast_Score=109, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020273
- ProDom:   PD060858 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9463; Mature: 9463

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRKNEIIHTHPLVGWDISTVDPYDAMMIRLHYVNSPDQATADAEVDRTLWLTTDVAKQL
CCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHH
ISILEAGIAKIESTEHLDYRKH
HHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MYRKNEIIHTHPLVGWDISTVDPYDAMMIRLHYVNSPDQATADAEVDRTLWLTTDVAKQL
CCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHH
ISILEAGIAKIESTEHLDYRKH
HHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]