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The map label for this gene is spr

Identifier: 85058930

GI number: 85058930

Start: 1559243

End: 1559818

Strand: Reverse

Name: spr

Synonym: SG0952

Alternate gene names: 85058930

Gene position: 1559818-1559243 (Counterclockwise)

Preceding gene: 85058931

Following gene: 85058929

Centisome position: 37.4

GC content: 49.83

Gene sequence:

>576_bases
ATGGTCAAATCTCAGCCTATCTTGAGATATGTTCTGCGGCTCATCCCCGCAGTGGCGGTTGCTGCCATGCTCTCCGCCTG
CAGTACTTCTCATAGCCCGAAACAAACCGCTGACATGCATGCAGTAAACGATTCAAATCATTTTTTACTGCAAGCCTCTC
AGGACGAATTTGAAGAAATGGTTCGTAATGTGGATATTAAATCCAAAATTATGGATCAATATGCCGACTGGAAAGGCGTG
CGTTACCGCCTCGGCGGCAGTACCAAGCGCGGAATTGATTGCTCCGGTTTCGTACAAATGACATTCCGTGAGCAATTTGG
CCTTGACCTGCCACGCTCTACGCTGGATCAACGGGAAATAGGCTCCAGAATTCAACGCACTAAGCTGCGTCCGGGCGACC
TGGTGCTGTTTAGCGCCAGCTCAACGGGCCGTCATGTAGGCATCTATCTGGGTAACGATCAATTTGTTCATGCTTCTACC
AGCAGTGGCGTGATGATTTCCAACCTGAATAAAAGCTACTGGAAATCCCGTTACCGTGAAGCCCGGCGGGTGTTGCCCAA
CGAAGCACAAAGTTAA

Upstream 100 bases:

>100_bases
ATGAACGAAATCTGTTCAATTAGGACGAGCGCTCAACTCTCATTGGTTTGGCATTTTATAACGACATTGTCGTTAAGGAC
TTCAAGGGATAACACGAATA

Downstream 100 bases:

>100_bases
ACTGGTTATTAATTGAACGTCCGCATTGCCCAATGAGAGATCGAAAAAGCCTCCTGCAAGCGGCTTTTTTATTGTTCATT
ACCACCACAATAATTAATAG

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MVKSQPILRYVLRLIPAVAVAAMLSACSTSHSPKQTADMHAVNDSNHFLLQASQDEFEEMVRNVDIKSKIMDQYADWKGV
RYRLGGSTKRGIDCSGFVQMTFREQFGLDLPRSTLDQREIGSRIQRTKLRPGDLVLFSASSTGRHVGIYLGNDQFVHAST
SSGVMISNLNKSYWKSRYREARRVLPNEAQS

Sequences:

>Translated_191_residues
MVKSQPILRYVLRLIPAVAVAAMLSACSTSHSPKQTADMHAVNDSNHFLLQASQDEFEEMVRNVDIKSKIMDQYADWKGV
RYRLGGSTKRGIDCSGFVQMTFREQFGLDLPRSTLDQREIGSRIQRTKLRPGDLVLFSASSTGRHVGIYLGNDQFVHAST
SSGVMISNLNKSYWKSRYREARRVLPNEAQS
>Mature_191_residues
MVKSQPILRYVLRLIPAVAVAAMLSACSTSHSPKQTADMHAVNDSNHFLLQASQDEFEEMVRNVDIKSKIMDQYADWKGV
RYRLGGSTKRGIDCSGFVQMTFREQFGLDLPRSTLDQREIGSRIQRTKLRPGDLVLFSASSTGRHVGIYLGNDQFVHAST
SSGVMISNLNKSYWKSRYREARRVLPNEAQS

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=185, Percent_Identity=71.3513513513514, Blast_Score=281, Evalue=2e-77,
Organism=Escherichia coli, GI1788001, Length=124, Percent_Identity=49.1935483870968, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1787944, Length=124, Percent_Identity=35.4838709677419, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 21530; Mature: 21530

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSQPILRYVLRLIPAVAVAAMLSACSTSHSPKQTADMHAVNDSNHFLLQASQDEFEEM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCEEEEEECHHHHHHH
VRNVDIKSKIMDQYADWKGVRYRLGGSTKRGIDCSGFVQMTFREQFGLDLPRSTLDQREI
HHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHEEHHHCCCCCCHHHHHHHHH
GSRIQRTKLRPGDLVLFSASSTGRHVGIYLGNDQFVHASTSSGVMISNLNKSYWKSRYRE
HHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCEEEEECCCCCEEEECCCHHHHHHHHHH
ARRVLPNEAQS
HHHCCCCCCCC
>Mature Secondary Structure
MVKSQPILRYVLRLIPAVAVAAMLSACSTSHSPKQTADMHAVNDSNHFLLQASQDEFEEM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCEEEEEECHHHHHHH
VRNVDIKSKIMDQYADWKGVRYRLGGSTKRGIDCSGFVQMTFREQFGLDLPRSTLDQREI
HHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHEEHHHCCCCCCHHHHHHHHH
GSRIQRTKLRPGDLVLFSASSTGRHVGIYLGNDQFVHASTSSGVMISNLNKSYWKSRYRE
HHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCEEEEECCCCCEEEECCCHHHHHHHHHH
ARRVLPNEAQS
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]