| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yeiU [H]
Identifier: 85058931
GI number: 85058931
Start: 1560293
End: 1560862
Strand: Reverse
Name: yeiU [H]
Synonym: SG0953
Alternate gene names: 85058931
Gene position: 1560862-1560293 (Counterclockwise)
Preceding gene: 85058934
Following gene: 85058930
Centisome position: 37.42
GC content: 58.42
Gene sequence:
>570_bases ATGTCTCGCCTCCCGACCATGGCGATGCTGAGCTTACTCGGCGTGGCGTTGTTCATTTCATGGTACCTGCCCGCACATCA CGGTATCTGGTTCACGCTCGATAGCCGCATCTACCACGCGGTTAATCACCAGGCGGTACGCCATCCGCAGTTTGCCGATT TTCTGGCTATTACCAACAACCGCATCTTTGATCTCGGCTCCTTGCTGACGATGGGCGCCCTATACCTGCGCTACTTCCTG CGCGCCGATGCCGCCGGCCGTCACCGCATGCTGGCGATTGTCCTGGCCCTGATCATCACCGCCCTGGTGCTTAACCAGCT TGGCCATCTGGTGCCGGTGTCGCATGTCAGCCCGTCGCGCTATTTTAAAGCAACGCCCGACGTCGTCAGCATTGCCGAGT TGACCCATATTCCCACCAAAGAGTTCTCAAGCGACAGCTTCCCGGGCGATCACGGCATGCTGCTGATGATTTTCGCCGCC TTTATGCTGCACTATTTTGGCCGCCGGGCTTTCCTGCAGGCCGTGTTGATTTTCCTGTTCTTCTCGGCGGCGGTTGCGAT GCGCTGGTGA
Upstream 100 bases:
>100_bases CGCGGACTGGAATCACTTTCAGAGCGAATTGTTAAAAATTCATTTATATCATATATCTTATATTTAAACATATTCAATTT CTCATATTAAGGGTTTTTCC
Downstream 100 bases:
>100_bases GTTGGTTTGAGCGCCGCCTGCCGCGCGCGACGTTGTTTAACCATCGTCATCAGCCGCACGGATAAGAAAATACTCTCCTC CGCGCCCCGGCGTGATACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSRLPTMAMLSLLGVALFISWYLPAHHGIWFTLDSRIYHAVNHQAVRHPQFADFLAITNNRIFDLGSLLTMGALYLRYFL RADAAGRHRMLAIVLALIITALVLNQLGHLVPVSHVSPSRYFKATPDVVSIAELTHIPTKEFSSDSFPGDHGMLLMIFAA FMLHYFGRRAFLQAVLIFLFFSAAVAMRW
Sequences:
>Translated_189_residues MSRLPTMAMLSLLGVALFISWYLPAHHGIWFTLDSRIYHAVNHQAVRHPQFADFLAITNNRIFDLGSLLTMGALYLRYFL RADAAGRHRMLAIVLALIITALVLNQLGHLVPVSHVSPSRYFKATPDVVSIAELTHIPTKEFSSDSFPGDHGMLLMIFAA FMLHYFGRRAFLQAVLIFLFFSAAVAMRW >Mature_188_residues SRLPTMAMLSLLGVALFISWYLPAHHGIWFTLDSRIYHAVNHQAVRHPQFADFLAITNNRIFDLGSLLTMGALYLRYFLR ADAAGRHRMLAIVLALIITALVLNQLGHLVPVSHVSPSRYFKATPDVVSIAELTHIPTKEFSSDSFPGDHGMLLMIFAAF MLHYFGRRAFLQAVLIFLFFSAAVAMRW
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BcrC/YbjG family [H]
Homologues:
Organism=Escherichia coli, GI87082062, Length=183, Percent_Identity=46.448087431694, Blast_Score=175, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 [H]
Pfam domain/function: PF01569 PAP2 [H]
EC number: NA
Molecular weight: Translated: 21346; Mature: 21214
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLPTMAMLSLLGVALFISWYLPAHHGIWFTLDSRIYHAVNHQAVRHPQFADFLAITNN CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCC RIFDLGSLLTMGALYLRYFLRADAAGRHRMLAIVLALIITALVLNQLGHLVPVSHVSPSR CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH YFKATPDVVSIAELTHIPTKEFSSDSFPGDHGMLLMIFAAFMLHYFGRRAFLQAVLIFLF HCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSAAVAMRW HHHHHHHCC >Mature Secondary Structure SRLPTMAMLSLLGVALFISWYLPAHHGIWFTLDSRIYHAVNHQAVRHPQFADFLAITNN CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCC RIFDLGSLLTMGALYLRYFLRADAAGRHRMLAIVLALIITALVLNQLGHLVPVSHVSPSR CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH YFKATPDVVSIAELTHIPTKEFSSDSFPGDHGMLLMIFAAFMLHYFGRRAFLQAVLIFLF HCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSAAVAMRW HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]