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The map label for this gene is ybfE [H]

Identifier: 85058841

GI number: 85058841

Start: 1418284

End: 1418598

Strand: Reverse

Name: ybfE [H]

Synonym: SG0863

Alternate gene names: 85058841

Gene position: 1418598-1418284 (Counterclockwise)

Preceding gene: 85058842

Following gene: 85058840

Centisome position: 34.01

GC content: 58.41

Gene sequence:

>315_bases
ATGGCAAAAGAACAAACGGACCGCACCACGCTGGATTTATTTACGGATGAACGTCGTCCGGGACGGCCGAAAACCAGCCC
CCTTTCAAGGGATGAACAGCTCAAAATCAACAAGCGCAACCAGCTGCGGCGCGATAAAGTGCGCGGGCTGCGCCGGGTGG
AGTTAAAAATTAATGCGCAGGCGGTATATGCGCTGAACAGATTGGCCGACCAGCGGGCGATGTCCCGCAGTGAGCTTATC
GAACTTATCCTGCTGGCGGAGCTTGAGCGCCTGCCGGCTGAAGGCGGGACGGACACACTGCCGGCCAGCGGTTGA

Upstream 100 bases:

>100_bases
CCAGGGACCGGTAAAGATAACGCTCGGAAGACGCCGGCCAGGGCTCAGGCCACCCGCCGGCGACCCTGCCGCTTACGGTT
GCATATCCCTTCATCAACTT

Downstream 100 bases:

>100_bases
ATGCTTGACAGGCATTACCCCTCCTGGGCGTCATCGCTTGCGGGCAAAGCGCCCTGCCGGGCAGCCGCCGGCAGCGGGAT
AGACATCCTGCCTGCGTGCA

Product: LexA regulated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MAKEQTDRTTLDLFTDERRPGRPKTSPLSRDEQLKINKRNQLRRDKVRGLRRVELKINAQAVYALNRLADQRAMSRSELI
ELILLAELERLPAEGGTDTLPASG

Sequences:

>Translated_104_residues
MAKEQTDRTTLDLFTDERRPGRPKTSPLSRDEQLKINKRNQLRRDKVRGLRRVELKINAQAVYALNRLADQRAMSRSELI
ELILLAELERLPAEGGTDTLPASG
>Mature_103_residues
AKEQTDRTTLDLFTDERRPGRPKTSPLSRDEQLKINKRNQLRRDKVRGLRRVELKINAQAVYALNRLADQRAMSRSELIE
LILLAELERLPAEGGTDTLPASG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081770, Length=95, Percent_Identity=75.7894736842105, Blast_Score=143, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002145 [H]

Pfam domain/function: PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 11882; Mature: 11751

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEQTDRTTLDLFTDERRPGRPKTSPLSRDEQLKINKRNQLRRDKVRGLRRVELKINAQ
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHCCCEEEEEEECHH
AVYALNRLADQRAMSRSELIELILLAELERLPAEGGTDTLPASG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKEQTDRTTLDLFTDERRPGRPKTSPLSRDEQLKINKRNQLRRDKVRGLRRVELKINAQ
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHCCCEEEEEEECHH
AVYALNRLADQRAMSRSELIELILLAELERLPAEGGTDTLPASG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]