Click here to switch to the map view.

The map label for this gene is ybfF [H]

Identifier: 85058842

GI number: 85058842

Start: 1418733

End: 1419542

Strand: Reverse

Name: ybfF [H]

Synonym: SG0864

Alternate gene names: 85058842

Gene position: 1419542-1418733 (Counterclockwise)

Preceding gene: 85058849

Following gene: 85058841

Centisome position: 34.03

GC content: 61.85

Gene sequence:

>810_bases
ATGAAATTGAACTATCGGCTGCAAGCGGCGCATCAGCCGGAACAGGGCCTGCCGGTGGTGTTTATCCACGGCCTATTCGG
CAGTCTGGATAATCTCGGCGGGCTGGCCCGTCCCCTTGGCGAGAACCATCGCACGCTGCAAATCGATTTACGCAATCACG
GCCTGTCCCCCCATGCGCCCACCATGCGTTATGACGAAATGGAGCAGGATGTGATGGCATTGCTGGACGCTCTACTTATT
GAGCGCTGCATCGTCATCGGTCATTCCATGGGGGGCAAAGTGGCAATGACGCTGCGCGCGCAGGCGCCGGGACGCATCGC
GCGGGCGGTGGTTATCGACATGGCGCCCGTCGCTTATGAGGTCCGCAGCCATGACGCCATTTTCACGGCCCTGGCGCGCG
TCAGCAACGCCGGGGTCACCCAGCGCAGCGAGGCGGCGCGGCTGATGGAGCAGGATATCGACGACGCCAGCACCGTGCAG
TTTCTACTAAAATCGTTTCATCAAGGCCACTGGCGTTTCGATGTTAAAAGCATTGCGCACAATTACGCCGACATTATCGG
CTGGCGGACCCAGGCGCCCTGGCCCGGGCCGGTGCTGTTTATCCGCGACGGCAATTCCCCTTATCTGGATGACCGCTACC
GCGACCAGATTCGTCAGCAATTTCCCACGCTCGCGCTCACGTGGTGGCCGGCGCTGGCCATTGGGTGCATGCCGAAAAGC
CCGAGGCGGTACTGCGCGCCGTCGCGCGTTTTCTGGCGGAGAGTTAAGCCGGCAGAGGCAGTTAGCCATTGTCGCCGCCC
GCGTCGCTAG

Upstream 100 bases:

>100_bases
CTCGTCCCGCCCGCGCAAGCGTCGATTTTTCCCCGCCGCGGCCTCTGCAACACTAAACTCATGATAGGCTACTACTTTTC
TTTACAGCAAAAGGAGCGCT

Downstream 100 bases:

>100_bases
GGTAAGATGACGGGTTTTTGGATGCCGGCTGCCTCCAGGGACCGGTAAAGATAACGCTCGGAAGACGCCGGCCAGGGCTC
AGGCCACCCGCCGGCGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKLNYRLQAAHQPEQGLPVVFIHGLFGSLDNLGGLARPLGENHRTLQIDLRNHGLSPHAPTMRYDEMEQDVMALLDALLI
ERCIVIGHSMGGKVAMTLRAQAPGRIARAVVIDMAPVAYEVRSHDAIFTALARVSNAGVTQRSEAARLMEQDIDDASTVQ
FLLKSFHQGHWRFDVKSIAHNYADIIGWRTQAPWPGPVLFIRDGNSPYLDDRYRDQIRQQFPTLALTWWPALAIGCMPKS
PRRYCAPSRVFWRRVKPAEAVSHCRRPRR

Sequences:

>Translated_269_residues
MKLNYRLQAAHQPEQGLPVVFIHGLFGSLDNLGGLARPLGENHRTLQIDLRNHGLSPHAPTMRYDEMEQDVMALLDALLI
ERCIVIGHSMGGKVAMTLRAQAPGRIARAVVIDMAPVAYEVRSHDAIFTALARVSNAGVTQRSEAARLMEQDIDDASTVQ
FLLKSFHQGHWRFDVKSIAHNYADIIGWRTQAPWPGPVLFIRDGNSPYLDDRYRDQIRQQFPTLALTWWPALAIGCMPKS
PRRYCAPSRVFWRRVKPAEAVSHCRRPRR
>Mature_269_residues
MKLNYRLQAAHQPEQGLPVVFIHGLFGSLDNLGGLARPLGENHRTLQIDLRNHGLSPHAPTMRYDEMEQDVMALLDALLI
ERCIVIGHSMGGKVAMTLRAQAPGRIARAVVIDMAPVAYEVRSHDAIFTALARVSNAGVTQRSEAARLMEQDIDDASTVQ
FLLKSFHQGHWRFDVKSIAHNYADIIGWRTQAPWPGPVLFIRDGNSPYLDDRYRDQIRQQFPTLALTWWPALAIGCMPKS
PRRYCAPSRVFWRRVKPAEAVSHCRRPRR

Specific function: Displays esterase activity toward palmitoyl-CoA, malonyl-CoA and pNP-butyrate [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI23200008, Length=264, Percent_Identity=34.469696969697, Blast_Score=134, Evalue=8e-32,
Organism=Homo sapiens, GI23200012, Length=251, Percent_Identity=34.6613545816733, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI223941839, Length=255, Percent_Identity=31.3725490196078, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI1786902, Length=222, Percent_Identity=50, Blast_Score=226, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17508535, Length=248, Percent_Identity=29.0322580645161, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17507063, Length=241, Percent_Identity=24.4813278008299, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321468, Length=233, Percent_Identity=30.0429184549356, Blast_Score=80, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24640348, Length=248, Percent_Identity=24.1935483870968, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 30476; Mature: 30476

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNYRLQAAHQPEQGLPVVFIHGLFGSLDNLGGLARPLGENHRTLQIDLRNHGLSPHAP
CCCCEEEEECCCCCCCCCEEEEEHHHHCHHHCCHHHHHCCCCCCEEEEEECCCCCCCCCC
TMRYDEMEQDVMALLDALLIERCIVIGHSMGGKVAMTLRAQAPGRIARAVVIDMAPVAYE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCHHHHH
VRSHDAIFTALARVSNAGVTQRSEAARLMEQDIDDASTVQFLLKSFHQGHWRFDVKSIAH
HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEHHHHHHH
NYADIIGWRTQAPWPGPVLFIRDGNSPYLDDRYRDQIRQQFPTLALTWWPALAIGCMPKS
HHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHCCCCCC
PRRYCAPSRVFWRRVKPAEAVSHCRRPRR
CHHHCCCHHHHHHHCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKLNYRLQAAHQPEQGLPVVFIHGLFGSLDNLGGLARPLGENHRTLQIDLRNHGLSPHAP
CCCCEEEEECCCCCCCCCEEEEEHHHHCHHHCCHHHHHCCCCCCEEEEEECCCCCCCCCC
TMRYDEMEQDVMALLDALLIERCIVIGHSMGGKVAMTLRAQAPGRIARAVVIDMAPVAYE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCHHHHH
VRSHDAIFTALARVSNAGVTQRSEAARLMEQDIDDASTVQFLLKSFHQGHWRFDVKSIAH
HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEHHHHHHH
NYADIIGWRTQAPWPGPVLFIRDGNSPYLDDRYRDQIRQQFPTLALTWWPALAIGCMPKS
HHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHCCCCCC
PRRYCAPSRVFWRRVKPAEAVSHCRRPRR
CHHHCCCHHHHHHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10493123 [H]