| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is fur
Identifier: 85058839
GI number: 85058839
Start: 1416708
End: 1417175
Strand: Reverse
Name: fur
Synonym: SG0861
Alternate gene names: 85058839
Gene position: 1417175-1416708 (Counterclockwise)
Preceding gene: 85058840
Following gene: 85058836
Centisome position: 33.98
GC content: 49.36
Gene sequence:
>468_bases ATGACTGACAATAACATCGCCTTAAAGAAGGCCGGCCTGAAAGTGACCCTTCCCAGGCTCAAGATCCTGGAAGTGTTGCA AGACCCGGAATGCCACCACGTCAGTGCGGAAGATCTGTATAAAAAGCTTATCGATATGGGTGAGGAAATCGGGCTGGCCA CCGTTTACCGCGTACTCAACCAGTTCGATGATGCCGGTATTGTCACCCGCCACAATTTTGAGGGCGGCAAATCGGTTTTC GAGCTCACCCAACAGCATCATCACGATCACCTTATTTGCCTGGATTGCGGCAAGGTCATCGAATTTCGCGATGAGTTTAT TGAAGCGCGCCAGCGTGATATCGCGAAAAAGCACAATATCAAACTGACCAACCACAGTCTCTATATTTATGGCCATTGCG CAGAGGGCGACTGCCGTGAAGATGAAACCCTGCATGATATAGATGATCCGCACGTCGTAAAATTCTGA
Upstream 100 bases:
>100_bases CGAGTTCTATGATGAGACAGTGAACCATTTTTCGGGCCGACGATTGTTATAGGCTGTGTTAGCTTATAGCTTGATTATCA AGTAACAGGACCAAACCCGC
Downstream 100 bases:
>100_bases CCGCCAACACCTGGGCCGTCAGATCACGAGCGAACAAAGAGAAACCGCCGCCGGCGGTTTTTTTATTTGTTGAGGCTGTA ACTGCCTGAGTCAACCTTAC
Product: ferric uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTDNNIALKKAGLKVTLPRLKILEVLQDPECHHVSAEDLYKKLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVF ELTQQHHHDHLICLDCGKVIEFRDEFIEARQRDIAKKHNIKLTNHSLYIYGHCAEGDCREDETLHDIDDPHVVKF
Sequences:
>Translated_155_residues MTDNNIALKKAGLKVTLPRLKILEVLQDPECHHVSAEDLYKKLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVF ELTQQHHHDHLICLDCGKVIEFRDEFIEARQRDIAKKHNIKLTNHSLYIYGHCAEGDCREDETLHDIDDPHVVKF >Mature_154_residues TDNNIALKKAGLKVTLPRLKILEVLQDPECHHVSAEDLYKKLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFE LTQQHHHDHLICLDCGKVIEFRDEFIEARQRDIAKKHNIKLTNHSLYIYGHCAEGDCREDETLHDIDDPHVVKF
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of several outer-membrane proteins including the iron transport operon [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=146, Percent_Identity=89.041095890411, Blast_Score=270, Evalue=4e-74,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17842; Mature: 17710
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNNIALKKAGLKVTLPRLKILEVLQDPECHHVSAEDLYKKLIDMGEEIGLATVYRVLN CCCCCEEEEECCCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHCCHHHHHHHHH QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFRDEFIEARQRDIAKKHNI HCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCE KLTNHSLYIYGHCAEGDCREDETLHDIDDPHVVKF EEECCEEEEEEECCCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure TDNNIALKKAGLKVTLPRLKILEVLQDPECHHVSAEDLYKKLIDMGEEIGLATVYRVLN CCCCEEEEECCCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHCCHHHHHHHHH QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFRDEFIEARQRDIAKKHNI HCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCE KLTNHSLYIYGHCAEGDCREDETLHDIDDPHVVKF EEECCEEEEEEECCCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9055816 [H]