| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85058759
Identifier: 85058759
GI number: 85058759
Start: 1304635
End: 1305936
Strand: Reverse
Name: 85058759
Synonym: SG0781
Alternate gene names: NA
Gene position: 1305936-1304635 (Counterclockwise)
Preceding gene: 85058770
Following gene: 85058758
Centisome position: 31.31
GC content: 55.07
Gene sequence:
>1302_bases ATGACGGTGCCGGTTCCGGTGCAAATCACACAATATCTGTGTAACTATTTCTATGACAAGTGGGGCCAACTTGGCATCAT CCTGCACCATGACAGCGAGCAGGGGCAATATCACCTGATCCAGAATGACCCCCTCACCCACAGACAAACCCGCGAGCAAT TTCCCTATGATGTCGCATCGCGTTCGGTCGATTTGCGCGCCTGCTCATCGGGCGTAGTCGAAGAGCATTATGATGCCTTC GGCAGGCCGATAAAGCTGCTGCGTGAAACGCGTAGCGCATTAACGACAGCGGGTTGCAACCCTACGCCGAAAGCCCGGAA CAGCCGATTGAGGCGACGCAGTCTCCTGACTCACGTCTGCCATCCGGCGTGCGAACTCAACAACATCGGTTTCCTCATCA GCGCCGTGGAATTTCAACGCGACGATATGCAGTGGATTATCAGGATCACCGAGACGCTATCACACCATTATGTGAATTAT CATTATGGCTTCCACGATCGCGTAAGCCTGGTGAATATTTGCGGCACTGGCGACATCCGCTATCGCTATGACCACCATGA TGGCCCGCCGACCCAGGTCCGTTTTATGCCCCCGTATCGGACGCCGCAGTCCCCTGCAATGCCTGCCGCAGCTCAGCATG TTCTGTATGAGCGCAGCCTCGATCGTTGGGGACGGATACTGACGGAAAGTCATGGGGGGCAACGCGCTAACCTTTGGCAC TACGAGGGTGCACGTCCCCTTCCGATTGCCTATACCGATGCCGGTCATCACAGCGTCGAATACCGTTATCATGAACATAT GAAGCATGCGCTCGTTGAAATCAAGCATGCCGATGGCCAGCGGCGTTTCAGCTATGATGCTGTCGGCCGGTTGACCTCGG TTCAGGATCATTTCCTCGACGATACGGCAGGCCCTTGTCTGCGTTATGTGTATAATAGCCAAGGGCAATTAATCCGCGAA ACGGTATGCGGCCCGCGCAACGATGAGGGTTTTTGGACCGAGTACGAATACAGTCTGTCCGGCCGCTTGCTGCAATCCCG CGATAGCCTTGGCCAGATCCAGCTTTATAACTATAACCGCGCGGGACGGCTGACAGCGCTTACCGCAAGCGAAGTTGAAC TTCAACTGGACTATGATACGTTCGGCCGGCTGGCGCAACATACCGTGACCGAGCGCAGCACGAGCAAAGGCTTGCGGCGA GAACTGTGCTACGGCTTTTTTAATCGGGTAACCCATCGCGATTACTCCTTGCGGGCCACAAAAGGCCGATGCCAGGGCGA TACTGATAACGCTGAAGTATAA
Upstream 100 bases:
>100_bases ACTGTGCATCTTTATCACGATGGTTTTGGCCGTTTGCATAGTAAGATCTACTCCATCGCCAGTCTGGCGGATGTAGCGGT AACGCTTGAGGAGCAGCTCT
Downstream 100 bases:
>100_bases CGAATTAGATAAAATCACCGCCAGAACAATAACGGAAACCGTCGCAAATCTCAGCCGCTCCCGCCACGAAAAATTTTTCT ATGATCGCCGCGGCTGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTVPVPVQITQYLCNYFYDKWGQLGIILHHDSEQGQYHLIQNDPLTHRQTREQFPYDVASRSVDLRACSSGVVEEHYDAF GRPIKLLRETRSALTTAGCNPTPKARNSRLRRRSLLTHVCHPACELNNIGFLISAVEFQRDDMQWIIRITETLSHHYVNY HYGFHDRVSLVNICGTGDIRYRYDHHDGPPTQVRFMPPYRTPQSPAMPAAAQHVLYERSLDRWGRILTESHGGQRANLWH YEGARPLPIAYTDAGHHSVEYRYHEHMKHALVEIKHADGQRRFSYDAVGRLTSVQDHFLDDTAGPCLRYVYNSQGQLIRE TVCGPRNDEGFWTEYEYSLSGRLLQSRDSLGQIQLYNYNRAGRLTALTASEVELQLDYDTFGRLAQHTVTERSTSKGLRR ELCYGFFNRVTHRDYSLRATKGRCQGDTDNAEV
Sequences:
>Translated_433_residues MTVPVPVQITQYLCNYFYDKWGQLGIILHHDSEQGQYHLIQNDPLTHRQTREQFPYDVASRSVDLRACSSGVVEEHYDAF GRPIKLLRETRSALTTAGCNPTPKARNSRLRRRSLLTHVCHPACELNNIGFLISAVEFQRDDMQWIIRITETLSHHYVNY HYGFHDRVSLVNICGTGDIRYRYDHHDGPPTQVRFMPPYRTPQSPAMPAAAQHVLYERSLDRWGRILTESHGGQRANLWH YEGARPLPIAYTDAGHHSVEYRYHEHMKHALVEIKHADGQRRFSYDAVGRLTSVQDHFLDDTAGPCLRYVYNSQGQLIRE TVCGPRNDEGFWTEYEYSLSGRLLQSRDSLGQIQLYNYNRAGRLTALTASEVELQLDYDTFGRLAQHTVTERSTSKGLRR ELCYGFFNRVTHRDYSLRATKGRCQGDTDNAEV >Mature_432_residues TVPVPVQITQYLCNYFYDKWGQLGIILHHDSEQGQYHLIQNDPLTHRQTREQFPYDVASRSVDLRACSSGVVEEHYDAFG RPIKLLRETRSALTTAGCNPTPKARNSRLRRRSLLTHVCHPACELNNIGFLISAVEFQRDDMQWIIRITETLSHHYVNYH YGFHDRVSLVNICGTGDIRYRYDHHDGPPTQVRFMPPYRTPQSPAMPAAAQHVLYERSLDRWGRILTESHGGQRANLWHY EGARPLPIAYTDAGHHSVEYRYHEHMKHALVEIKHADGQRRFSYDAVGRLTSVQDHFLDDTAGPCLRYVYNSQGQLIRET VCGPRNDEGFWTEYEYSLSGRLLQSRDSLGQIQLYNYNRAGRLTALTASEVELQLDYDTFGRLAQHTVTERSTSKGLRRE LCYGFFNRVTHRDYSLRATKGRCQGDTDNAEV
Specific function: Unknown
COG id: COG3209
COG function: function code M; Rhs family protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50064; Mature: 49932
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPVPVQITQYLCNYFYDKWGQLGIILHHDSEQGQYHLIQNDPLTHRQTREQFPYDVAS CCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHCCHHHHH RSVDLRACSSGVVEEHYDAFGRPIKLLRETRSALTTAGCNPTPKARNSRLRRRSLLTHVC CCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH HPACELNNIGFLISAVEFQRDDMQWIIRITETLSHHYVNYHYGFHDRVSLVNICGTGDIR CCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCEEEEECCCCCCEEEEEEECCCCEE YRYDHHDGPPTQVRFMPPYRTPQSPAMPAAAQHVLYERSLDRWGRILTESHGGQRANLWH EEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE YEGARPLPIAYTDAGHHSVEYRYHEHMKHALVEIKHADGQRRFSYDAVGRLTSVQDHFLD CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHEECCCCCCEECHHHHHHHHHHHHHHCC DTAGPCLRYVYNSQGQLIRETVCGPRNDEGFWTEYEYSLSGRLLQSRDSLGQIQLYNYNR CCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEECCCHHHHCCCCCCEEEEEECCC AGRLTALTASEVELQLDYDTFGRLAQHTVTERSTSKGLRRELCYGFFNRVTHRDYSLRAT CCCEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC KGRCQGDTDNAEV CCCCCCCCCCCCC >Mature Secondary Structure TVPVPVQITQYLCNYFYDKWGQLGIILHHDSEQGQYHLIQNDPLTHRQTREQFPYDVAS CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHCCHHHHH RSVDLRACSSGVVEEHYDAFGRPIKLLRETRSALTTAGCNPTPKARNSRLRRRSLLTHVC CCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH HPACELNNIGFLISAVEFQRDDMQWIIRITETLSHHYVNYHYGFHDRVSLVNICGTGDIR CCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCEEEEECCCCCCEEEEEEECCCCEE YRYDHHDGPPTQVRFMPPYRTPQSPAMPAAAQHVLYERSLDRWGRILTESHGGQRANLWH EEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE YEGARPLPIAYTDAGHHSVEYRYHEHMKHALVEIKHADGQRRFSYDAVGRLTSVQDHFLD CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHEECCCCCCEECHHHHHHHHHHHHHHCC DTAGPCLRYVYNSQGQLIRETVCGPRNDEGFWTEYEYSLSGRLLQSRDSLGQIQLYNYNR CCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEECCCHHHHCCCCCCEEEEEECCC AGRLTALTASEVELQLDYDTFGRLAQHTVTERSTSKGLRRELCYGFFNRVTHRDYSLRAT CCCEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC KGRCQGDTDNAEV CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA