| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85058700
Identifier: 85058700
GI number: 85058700
Start: 1205877
End: 1207121
Strand: Reverse
Name: 85058700
Synonym: SG0722
Alternate gene names: NA
Gene position: 1207121-1205877 (Counterclockwise)
Preceding gene: 85058701
Following gene: 85058699
Centisome position: 28.94
GC content: 48.67
Gene sequence:
>1245_bases ATGTCTGATATTAATGAAATGCTTAAGAAAATAATGGCTTCTATCGAAGAAGCCAGCAGCAAATATAGCGCCCAGGCAGA GAAAGCCCTGAAGGAAGCGCAAAAATCGGGTGAGCTTTCCGCTGAAACCAAAGCGGCCGTTGATAAAATGGCGGTCGAAC TGAACACCTTACGCGAAGCAGAAAAAACCCTGAAAGCCCAGGTAGGCGAAGTTGAACAACATCTTGCCCAAATGCCTGTG GCTAATGCGTTGAACGTGGTGAGTTCTATTGGTCAACAGGTGGTTGGCATGGAGGTAGTGCAGGCTTTAGGCTCGGGCAT GGAATCCAGTAAACGAGTAATAGCCCCGATTAACGCCGCACTTATTTCATCGGATGTCACAGGAACGATTGTCGCCCCCG ACCGTCAAGCAGACATCTTGACCAAGCCGAAGCAACGGTTGTTTATTCGTGATTTGATTGCCAGTGGAAAGACGCAAAGT AACACGATTTATTACGTGAAGCAGAAAGGATTTACCAATAATGCCAAGACTGTCGCGGAAAATACCGCCAAGCCCTATAG CACGATTGAATTTGAAGAGGCAACAGTCCCCGTTCGCACGATTGCCCATATGTTTAAAGCCTCCAAGCAAATTCTGGATG ACTTTTCGCAACTGGCCTCCCTTATCGATATGGAGCTACGTTATGGCCTGAAATACGTTGAAGAGCAGCAAATTCTCTTC GGTGACGGTACCGGCTCAAACCTTAACGGGATCTTTACTCAAGCCACTGCATTCAAAGCAGAATTAAAACCAGCACATCG AACCGCGATCGATGATCTGCGGCTTGCCATGCTACAAGCGCAACTGGCACGGATCCCCGCGACAGGCCATGTGTTGCACT TTACCAACTGGGCACAGATTGAACTTATCAAGGATACGCTGGGGCGTTATCTCCTCTCCAATCCGGCAGCCCTGACTACG CCGACTTTGTGGGGCTTACCCGTTGTCGTCACAGAAGCCGCTGAGTTTAAAGATAAATTCCTGGTGGGGGCTTTCAATCT AGGTGCGCAACTGTTTGACCGTGAAGAAGCAAGCGTGGTGATCAGTACCGAGAATACCGATGATTTTGAAAAGAATATGA TTTCGATTCGTTGCGAAGAGCGTCTGGCGCTCGCGGTTTACCGCCCTGAAGCCTTTATCAAAGGTGACTTAACCAAGATA GAGGTTTCAGGTGGCGCGGGAAAAGGTGGGAATAACGGAGAGTAA
Upstream 100 bases:
>100_bases TACGCTGTCCGCTACCCCTGATGTTTCTTCCGAGACCTTGACACAACTGGATAATGCCTTGCGTCGTCTGGTGTCGATAC CCTATTAAACTGGAGACAAT
Downstream 100 bases:
>100_bases TCAACGTTAAACACAATGGCCTACATGGGTAGGCCATTTTTTACTGGAAATAAACCAACATGTTTATTGACAAAGAACAG GTCAAGCGACAATGCAGAAT
Product: phage major head protein
Products: NA
Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; Head Protein; Phage Head; Capsid Protein; Phage Capsid Protein; Phage Head Protein; Prophage LambdaSo; HK97 Family Phage Prohead Protease; Phage Protein; Capsid Protein HK; Phage Capsid Family; Phage Capsid Subunit
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MSDINEMLKKIMASIEEASSKYSAQAEKALKEAQKSGELSAETKAAVDKMAVELNTLREAEKTLKAQVGEVEQHLAQMPV ANALNVVSSIGQQVVGMEVVQALGSGMESSKRVIAPINAALISSDVTGTIVAPDRQADILTKPKQRLFIRDLIASGKTQS NTIYYVKQKGFTNNAKTVAENTAKPYSTIEFEEATVPVRTIAHMFKASKQILDDFSQLASLIDMELRYGLKYVEEQQILF GDGTGSNLNGIFTQATAFKAELKPAHRTAIDDLRLAMLQAQLARIPATGHVLHFTNWAQIELIKDTLGRYLLSNPAALTT PTLWGLPVVVTEAAEFKDKFLVGAFNLGAQLFDREEASVVISTENTDDFEKNMISIRCEERLALAVYRPEAFIKGDLTKI EVSGGAGKGGNNGE
Sequences:
>Translated_414_residues MSDINEMLKKIMASIEEASSKYSAQAEKALKEAQKSGELSAETKAAVDKMAVELNTLREAEKTLKAQVGEVEQHLAQMPV ANALNVVSSIGQQVVGMEVVQALGSGMESSKRVIAPINAALISSDVTGTIVAPDRQADILTKPKQRLFIRDLIASGKTQS NTIYYVKQKGFTNNAKTVAENTAKPYSTIEFEEATVPVRTIAHMFKASKQILDDFSQLASLIDMELRYGLKYVEEQQILF GDGTGSNLNGIFTQATAFKAELKPAHRTAIDDLRLAMLQAQLARIPATGHVLHFTNWAQIELIKDTLGRYLLSNPAALTT PTLWGLPVVVTEAAEFKDKFLVGAFNLGAQLFDREEASVVISTENTDDFEKNMISIRCEERLALAVYRPEAFIKGDLTKI EVSGGAGKGGNNGE >Mature_413_residues SDINEMLKKIMASIEEASSKYSAQAEKALKEAQKSGELSAETKAAVDKMAVELNTLREAEKTLKAQVGEVEQHLAQMPVA NALNVVSSIGQQVVGMEVVQALGSGMESSKRVIAPINAALISSDVTGTIVAPDRQADILTKPKQRLFIRDLIASGKTQSN TIYYVKQKGFTNNAKTVAENTAKPYSTIEFEEATVPVRTIAHMFKASKQILDDFSQLASLIDMELRYGLKYVEEQQILFG DGTGSNLNGIFTQATAFKAELKPAHRTAIDDLRLAMLQAQLARIPATGHVLHFTNWAQIELIKDTLGRYLLSNPAALTTP TLWGLPVVVTEAAEFKDKFLVGAFNLGAQLFDREEASVVISTENTDDFEKNMISIRCEERLALAVYRPEAFIKGDLTKIE VSGGAGKGGNNGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45072; Mature: 44941
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDINEMLKKIMASIEEASSKYSAQAEKALKEAQKSGELSAETKAAVDKMAVELNTLREA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH EKTLKAQVGEVEQHLAQMPVANALNVVSSIGQQVVGMEVVQALGSGMESSKRVIAPINAA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHH LISSDVTGTIVAPDRQADILTKPKQRLFIRDLIASGKTQSNTIYYVKQKGFTNNAKTVAE HHCCCCCEEEECCCCCCCHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHH NTAKPYSTIEFEEATVPVRTIAHMFKASKQILDDFSQLASLIDMELRYGLKYVEEQQILF CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE GDGTGSNLNGIFTQATAFKAELKPAHRTAIDDLRLAMLQAQLARIPATGHVLHFTNWAQI ECCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH ELIKDTLGRYLLSNPAALTTPTLWGLPVVVTEAAEFKDKFLVGAFNLGAQLFDREEASVV HHHHHHHHHHHHCCCCCCCCCCCCCCHHEEECHHHHHHHHEEEHHHHHHHHHCCCCCEEE ISTENTDDFEKNMISIRCEERLALAVYRPEAFIKGDLTKIEVSGGAGKGGNNGE EEECCCCHHHHCEEEEEECCEEEEEEECCCHHEECCCEEEEECCCCCCCCCCCC >Mature Secondary Structure SDINEMLKKIMASIEEASSKYSAQAEKALKEAQKSGELSAETKAAVDKMAVELNTLREA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH EKTLKAQVGEVEQHLAQMPVANALNVVSSIGQQVVGMEVVQALGSGMESSKRVIAPINAA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHH LISSDVTGTIVAPDRQADILTKPKQRLFIRDLIASGKTQSNTIYYVKQKGFTNNAKTVAE HHCCCCCEEEECCCCCCCHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHH NTAKPYSTIEFEEATVPVRTIAHMFKASKQILDDFSQLASLIDMELRYGLKYVEEQQILF CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE GDGTGSNLNGIFTQATAFKAELKPAHRTAIDDLRLAMLQAQLARIPATGHVLHFTNWAQI ECCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH ELIKDTLGRYLLSNPAALTTPTLWGLPVVVTEAAEFKDKFLVGAFNLGAQLFDREEASVV HHHHHHHHHHHHCCCCCCCCCCCCCCHHEEECHHHHHHHHEEEHHHHHHHHHCCCCCEEE ISTENTDDFEKNMISIRCEERLALAVYRPEAFIKGDLTKIEVSGGAGKGGNNGE EEECCCCHHHHCEEEEEECCEEEEEEECCCHHEECCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA