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The map label for this gene is ymfO [C]

Identifier: 85058701

GI number: 85058701

Start: 1208027

End: 1209355

Strand: Reverse

Name: ymfO [C]

Synonym: SG0723

Alternate gene names: 85058701

Gene position: 1209355-1208027 (Counterclockwise)

Preceding gene: 85058702

Following gene: 85058700

Centisome position: 28.99

GC content: 47.78

Gene sequence:

>1329_bases
GTGAAAAAACATCAATCTCCCGGTAAAATTAAAAGCGCGGTGCTCAACTGGCTAGGGGTGCCACAGAATTTAACCGATAC
GCTGTCATCGTTTCATGACTATAGCCAGAGTAAGAGTGGGCAAGTGGTGACAACGGATAAAGTCCTGCAACTTTCTGCGG
TCTGGGCGTGTGTGCGTCTGTTGAGTGAATCAATATCCACGTTACCGCTCAAACTCTATCACCGTAAGTCGGATGGTTCA
CGCAGCCTCGCACAGCAACACCCTGCTTATCCTGTCTTGTGTCGTCGTCCTAACCTGGAAATGACACCTTCGCGTTTTAT
CCAAATGATTGTTGCTAGCTTGTGTTTACGTGGTAATGCCTTTGTTGAAAAAAAGAAGGTCGGTCAGCGTCTGGTCTCCC
TCGTCCCACTATTACCCCAATACATCACCGTTAAACGACGTGATAACGGGCGACTGGAATACCACTATACCAACGACACC
AAACCGGGTTATTCCTCATTAAAACCGCGAGTTATTGCAGATAATGACATGATGCACATACGGGGGTTCGGATTAGACGG
CATTTGCGGCATGATGCCGTTGAAAACGGGTCGTGAGGTGTTTGGCTCGGCAATGTCGCTCGAAACGACGGCAGCGCGAT
ATTTCCAGAAAGGCATGTCGGCATCCGGTTTTATCTCGTTCGATAAGTTGTTGTCAGAAGAACAACGTGAAAGATTTAAT
AAGCATCTTGAAAACTTTGCTGGCTCAGAAAATACCGGCAAAGTCATGCTGCTGGAAGCCGGAATGAAATTTAATGGTAT
CACCCTCGATCCACAAACCTCACAAATGTTGGAAAGCCGCGATCATAGCATCGAAGAAATCTGCCGTTGGTATCGCGTTC
CACCGTTTATGGTCGGTCATATTACGAAACAAAGCAGTTGGGCTTCTAGCGTGGAAGGGATGAACCTGATTTTCTTGACC
AATACATTACGGCCCTTACTGGTCAATATTGAACAGGAAATCGCCCGCTGTCTGCTGGATAATGACGAGGATTATTTTGC
AGAATTTTCTGTTGAAGGACTGCTCAGAACCGATAGCACGGGTAGAGCAGCCTATTACACTACTGCGCTACAAAATGGCT
GGATGAGTCGCAATGATGTGAGGAGACTGGAAAATCTGCCGCCGATTGAGGGCGGAGACCTGTATACCGTTCAGTTGAAC
CTGACGCCCCTCGATCAACTGGGGCAGGAGAATGACGGCGAAAAAGTGCGAGCGGCTCTAAATGCCTGGTTATTTCCTGA
AAAATCCTCATCTCATCACCCGACTGGCACCCCGCAAGAAACAGAATAA

Upstream 100 bases:

>100_bases
TGGTAGCACTGGCGATGGCAATCGGAGCCGCCGAGGTGCTTGAAGAAGAAACCGGCGATCTGGATGGCTTTTTAACAAAT
CCGATTATGGTAGGACTGTA

Downstream 100 bases:

>100_bases
CTGGAGTTTTTCCCGATGAAAAAAAGTGCACTTCCGGTATTACCGGCGGTTTTTCCCTGTCCGAAAATGACCAATGAAAT
TTCACCGTCAGCATTGGCAA

Product: phage portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MKKHQSPGKIKSAVLNWLGVPQNLTDTLSSFHDYSQSKSGQVVTTDKVLQLSAVWACVRLLSESISTLPLKLYHRKSDGS
RSLAQQHPAYPVLCRRPNLEMTPSRFIQMIVASLCLRGNAFVEKKKVGQRLVSLVPLLPQYITVKRRDNGRLEYHYTNDT
KPGYSSLKPRVIADNDMMHIRGFGLDGICGMMPLKTGREVFGSAMSLETTAARYFQKGMSASGFISFDKLLSEEQRERFN
KHLENFAGSENTGKVMLLEAGMKFNGITLDPQTSQMLESRDHSIEEICRWYRVPPFMVGHITKQSSWASSVEGMNLIFLT
NTLRPLLVNIEQEIARCLLDNDEDYFAEFSVEGLLRTDSTGRAAYYTTALQNGWMSRNDVRRLENLPPIEGGDLYTVQLN
LTPLDQLGQENDGEKVRAALNAWLFPEKSSSHHPTGTPQETE

Sequences:

>Translated_442_residues
MKKHQSPGKIKSAVLNWLGVPQNLTDTLSSFHDYSQSKSGQVVTTDKVLQLSAVWACVRLLSESISTLPLKLYHRKSDGS
RSLAQQHPAYPVLCRRPNLEMTPSRFIQMIVASLCLRGNAFVEKKKVGQRLVSLVPLLPQYITVKRRDNGRLEYHYTNDT
KPGYSSLKPRVIADNDMMHIRGFGLDGICGMMPLKTGREVFGSAMSLETTAARYFQKGMSASGFISFDKLLSEEQRERFN
KHLENFAGSENTGKVMLLEAGMKFNGITLDPQTSQMLESRDHSIEEICRWYRVPPFMVGHITKQSSWASSVEGMNLIFLT
NTLRPLLVNIEQEIARCLLDNDEDYFAEFSVEGLLRTDSTGRAAYYTTALQNGWMSRNDVRRLENLPPIEGGDLYTVQLN
LTPLDQLGQENDGEKVRAALNAWLFPEKSSSHHPTGTPQETE
>Mature_442_residues
MKKHQSPGKIKSAVLNWLGVPQNLTDTLSSFHDYSQSKSGQVVTTDKVLQLSAVWACVRLLSESISTLPLKLYHRKSDGS
RSLAQQHPAYPVLCRRPNLEMTPSRFIQMIVASLCLRGNAFVEKKKVGQRLVSLVPLLPQYITVKRRDNGRLEYHYTNDT
KPGYSSLKPRVIADNDMMHIRGFGLDGICGMMPLKTGREVFGSAMSLETTAARYFQKGMSASGFISFDKLLSEEQRERFN
KHLENFAGSENTGKVMLLEAGMKFNGITLDPQTSQMLESRDHSIEEICRWYRVPPFMVGHITKQSSWASSVEGMNLIFLT
NTLRPLLVNIEQEIARCLLDNDEDYFAEFSVEGLLRTDSTGRAAYYTTALQNGWMSRNDVRRLENLPPIEGGDLYTVQLN
LTPLDQLGQENDGEKVRAALNAWLFPEKSSSHHPTGTPQETE

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 49815; Mature: 49815

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHQSPGKIKSAVLNWLGVPQNLTDTLSSFHDYSQSKSGQVVTTDKVLQLSAVWACVRL
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH
LSESISTLPLKLYHRKSDGSRSLAQQHPAYPVLCRRPNLEMTPSRFIQMIVASLCLRGNA
HHHHHHHCCEEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCH
FVEKKKVGQRLVSLVPLLPQYITVKRRDNGRLEYHYTNDTKPGYSSLKPRVIADNDMMHI
HHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCCHHHCCCEEEECCCEEEE
RGFGLDGICGMMPLKTGREVFGSAMSLETTAARYFQKGMSASGFISFDKLLSEEQRERFN
ECCCCCCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KHLENFAGSENTGKVMLLEAGMKFNGITLDPQTSQMLESRDHSIEEICRWYRVPPFMVGH
HHHHHHCCCCCCCEEEEEECCCCCCCEEECCCHHHHHHHCCCCHHHHHHHHCCCCHHHHH
ITKQSSWASSVEGMNLIFLTNTLRPLLVNIEQEIARCLLDNDEDYFAEFSVEGLLRTDST
HHCCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCC
GRAAYYTTALQNGWMSRNDVRRLENLPPIEGGDLYTVQLNLTPLDQLGQENDGEKVRAAL
CCEEEEEHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCHHHCCCCCCHHHHHHHH
NAWLFPEKSSSHHPTGTPQETE
HHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKHQSPGKIKSAVLNWLGVPQNLTDTLSSFHDYSQSKSGQVVTTDKVLQLSAVWACVRL
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH
LSESISTLPLKLYHRKSDGSRSLAQQHPAYPVLCRRPNLEMTPSRFIQMIVASLCLRGNA
HHHHHHHCCEEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCH
FVEKKKVGQRLVSLVPLLPQYITVKRRDNGRLEYHYTNDTKPGYSSLKPRVIADNDMMHI
HHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCCHHHCCCEEEECCCEEEE
RGFGLDGICGMMPLKTGREVFGSAMSLETTAARYFQKGMSASGFISFDKLLSEEQRERFN
ECCCCCCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KHLENFAGSENTGKVMLLEAGMKFNGITLDPQTSQMLESRDHSIEEICRWYRVPPFMVGH
HHHHHHCCCCCCCEEEEEECCCCCCCEEECCCHHHHHHHCCCCHHHHHHHHCCCCHHHHH
ITKQSSWASSVEGMNLIFLTNTLRPLLVNIEQEIARCLLDNDEDYFAEFSVEGLLRTDST
HHCCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCC
GRAAYYTTALQNGWMSRNDVRRLENLPPIEGGDLYTVQLNLTPLDQLGQENDGEKVRAAL
CCEEEEEHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCHHHCCCCCCHHHHHHHH
NAWLFPEKSSSHHPTGTPQETE
HHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA