| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is gluQ [H]
Identifier: 85058469
GI number: 85058469
Start: 848842
End: 849465
Strand: Reverse
Name: gluQ [H]
Synonym: SG0491
Alternate gene names: 85058469
Gene position: 849465-848842 (Counterclockwise)
Preceding gene: 85058470
Following gene: 85058468
Centisome position: 20.37
GC content: 62.34
Gene sequence:
>624_bases ATGCCAGCCTCAGTTTCCTACATCGGACGTTTCGCTCCGTCGCCTTCCGGCGCGCTTCATTTTGGTTCTCTCGCCGCCGC CCTCGGCAGCTATTTGCAGGCGCGCGCATGTCGCGGCCAGTGGCGGGTGCGCATCGAAGATATCGACCCTCCACGGGAAG TCCACGGCGCCGCCGATACCCTGCTGCGCCAGTTACGCCATTATGGCCTGCACTGGGACGGTCCGGTCATGTATCAGTCG CAGCGGCATGAGGCGTATTTGGCCGCGCTGGTGACGCTGCACTGGCGCGGCCTCAGTTATTATTGCGACTGCACCCGCAG CCGTATCCAGAGCCTGGGCGGTCTCTACGACGGCCATTGCCGCGATCAACACCTGAGCGCCGCAGGGGCGGCTATCCGCC TGCGGCAAACCGCGCCGGTGTTTCATTTTCACGATAAATTGCGTGGCCGAATCGATGCCAGCCCGGTGCTGGCGCAGGAA GATTTTATCATCCGCCGCCGCGACGGGCTGTTCGCCTATAATCTGGCGGTGGTGGTGGTGGATGCCGCTACGGGCGTCAC GGAGGTCGTGCGTGGCGCCGATCTCATCGCCCCAATTAGCGTTCTATCGTCAATTAGGTTATAA
Upstream 100 bases:
>100_bases AAGCAGATGGCAGGGTAAGAGTGAGCCCAGTTTACTGCGGTGTCGTTGACGGAAATTCATGACATCGCGGTAGCTGCTCG GTTACTCCTTCATCACCATC
Downstream 100 bases:
>100_bases AGAACCTGACTATATTCATCTGTCGCCGTCAGGGCTGAAATTATCGAAATAAAATCACGCTCCGGCGCTGCCGATGAGCG ACCCCCGACCGCTGCTGACG
Product: putative glutamyl-tRNA synthase
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MPASVSYIGRFAPSPSGALHFGSLAAALGSYLQARACRGQWRVRIEDIDPPREVHGAADTLLRQLRHYGLHWDGPVMYQS QRHEAYLAALVTLHWRGLSYYCDCTRSRIQSLGGLYDGHCRDQHLSAAGAAIRLRQTAPVFHFHDKLRGRIDASPVLAQE DFIIRRRDGLFAYNLAVVVVDAATGVTEVVRGADLIAPISVLSSIRL
Sequences:
>Translated_207_residues MPASVSYIGRFAPSPSGALHFGSLAAALGSYLQARACRGQWRVRIEDIDPPREVHGAADTLLRQLRHYGLHWDGPVMYQS QRHEAYLAALVTLHWRGLSYYCDCTRSRIQSLGGLYDGHCRDQHLSAAGAAIRLRQTAPVFHFHDKLRGRIDASPVLAQE DFIIRRRDGLFAYNLAVVVVDAATGVTEVVRGADLIAPISVLSSIRL >Mature_206_residues PASVSYIGRFAPSPSGALHFGSLAAALGSYLQARACRGQWRVRIEDIDPPREVHGAADTLLRQLRHYGLHWDGPVMYQSQ RHEAYLAALVTLHWRGLSYYCDCTRSRIQSLGGLYDGHCRDQHLSAAGAAIRLRQTAPVFHFHDKLRGRIDASPVLAQED FIIRRRDGLFAYNLAVVVVDAATGVTEVVRGADLIAPISVLSSIRL
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=217, Percent_Identity=34.1013824884793, Blast_Score=92, Evalue=3e-19, Organism=Escherichia coli, GI226510925, Length=196, Percent_Identity=71.4285714285714, Blast_Score=281, Evalue=2e-77, Organism=Escherichia coli, GI1788743, Length=215, Percent_Identity=34.4186046511628, Blast_Score=108, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71993394, Length=214, Percent_Identity=30.8411214953271, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324540, Length=211, Percent_Identity=32.7014218009479, Blast_Score=101, Evalue=1e-22, Organism=Drosophila melanogaster, GI24665321, Length=213, Percent_Identity=32.8638497652582, Blast_Score=92, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 22887; Mature: 22756
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASVSYIGRFAPSPSGALHFGSLAAALGSYLQARACRGQWRVRIEDIDPPREVHGAADT CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHH LLRQLRHYGLHWDGPVMYQSQRHEAYLAALVTLHWRGLSYYCDCTRSRIQSLGGLYDGHC HHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC RDQHLSAAGAAIRLRQTAPVFHFHDKLRGRIDASPVLAQEDFIIRRRDGLFAYNLAVVVV CHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCEECCCEEEEECCCCEEEEEEEEEE DAATGVTEVVRGADLIAPISVLSSIRL ECCCCHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure PASVSYIGRFAPSPSGALHFGSLAAALGSYLQARACRGQWRVRIEDIDPPREVHGAADT CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHH LLRQLRHYGLHWDGPVMYQSQRHEAYLAALVTLHWRGLSYYCDCTRSRIQSLGGLYDGHC HHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC RDQHLSAAGAAIRLRQTAPVFHFHDKLRGRIDASPVLAQEDFIIRRRDGLFAYNLAVVVV CHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCEECCCEEEEECCCCEEEEEEEEEE DAATGVTEVVRGADLIAPISVLSSIRL ECCCCHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA