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The map label for this gene is yaaJ [H]

Identifier: 85058386

GI number: 85058386

Start: 721523

End: 723001

Strand: Reverse

Name: yaaJ [H]

Synonym: SG0408

Alternate gene names: 85058386

Gene position: 723001-721523 (Counterclockwise)

Preceding gene: 85058390

Following gene: 85058385

Centisome position: 17.33

GC content: 59.43

Gene sequence:

>1479_bases
ATGGCTGAGCTATTGAATTTTATCAATAACCTGTTACGGGATTCACTCTTAATTTATCTGCTGTTGGGAACCAGCATCTG
GTTTACGCTACGCACCGGCTTTATCCAGATACGCCATTTCTGCCATACCTTCACGATTCTCAAAGACTCAGGGACGCGCG
GCGGCGGCGGTATTTCACCGTTTCAGGCCTTATGCACCTCCCTTGCCGCCCGTATCGGCTGCGGTAACCTGATGGGCGTC
GCCATCGCGCTGATCCTGGGCGGACCGGGCGCCATTTTCTGGATGTGGCTGGCGGCGTTGATTGGCATGGCGACCGCCTT
TGCGGAAAGCACCCTGGCGCAGCTGTACAAAATACGTGATGACCGCGGCAACGCCTGCGGCGGGCCGGCTTGGTATATGG
CCAACGGACTCGGTTTGCGCTGGATGGGCACGTTATTCACCCTCTTTCTGTTGGCGGGCTATGGCGGTTTTTTCAGCGCC
GTTCAGGCCAACGCGATTACGCTGTCCGCGCAGCAGCTGTCCGGCATGGGCCGCTGGCCGATAACCCTGGCTCTGCTTAT
CCTGAGTGCCGCGGCCATTTTCGGCGGTCTTCGCGCCATCGCCCGCCTGACCCAATGGCTGGTGCCTATAATAGGTATTA
TATACTTACTACTGGCAGGTTGGGTGGTCGTGCATCACTGGCGCCAGCTCGCGACGGTCGCCGCCCTGGTGTTCAACAGC
GCCTTTGGCCTGCCGGAAGCCGCCTCGGGGCTGGTCGGCTATGGCCTGGCGCAGGCGATTTTCCAAGGGGTACAGCGCGG
TTTGTTCTCAAACGAGGCGGGCACTGGCTCGGCGCCGAATATCGCCGCCGCCGCCGCGCCCTGGCCGCCGCACCCTGCCT
CGCAAGGCTATATTCAGATGTTGGCGGTGTTCATCGATACCCTGGTTATCTGCAGCGCCACGGCCGCAATCATCCTCACC
TCCGGCACGCTGGAGCATGCTCATGCCGATCTCCACGGCATCGCGCTGATTAATCAAGCGCTGGCCACGGTGACCGGTCA
CTGGAGCATGCCGCTACTCATGGCGTTGGTGTTTGTGTTCTCCTTCGCCGCCATCATTGGCAATTACGCCTATGCGGAAA
GCAGCCTGCGTTTTTTCGTGCTGCAGCCAATGAAGCTGAAATGGCTGCTGCGTCTGCTGACGCTGACCATGATACTGTTT
GGCTGCGTAGCGGAAGTCTCGGTGGTCTGGAGACTGGCGGACCTGGCGATGGGCCTGATGACGATAACCAACTTGATCGC
CCTTTTATTGCTGTCGCCGGTCGTGTTGATGCTGGCCAATGATTACAATAGCCAGCGCGCCATCGGGAAACTACCGACAT
TTTATGCGGTAAACTTCCCGGCTATCGCACCGCAGTTGGCGCCGGATCTGTGGGGACGGCCGACCGCGTCACACCAGGAA
AGCAGCAGCACGGCAGCGCCCAAACCCCTTGACCGTTAA

Upstream 100 bases:

>100_bases
ACCTGTCGCACCTATCGATGAAATCATTCGTAAAATAGGTAAAATGGGCGCTGGGCCCTACAACACCCAGCCAGGATGCT
GGAGCAGGAGAAAAGGAACG

Downstream 100 bases:

>100_bases
CGCGCCGCCGCGACATAACCGGCGCCCGTCTTTTTTCGCGACAACAGGAATTTGCAATGCTGATTGTTATTTCTCCGGCG
AAAACGCTGGATTTTCAGAG

Product: alanine-sodium transport protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MAELLNFINNLLRDSLLIYLLLGTSIWFTLRTGFIQIRHFCHTFTILKDSGTRGGGGISPFQALCTSLAARIGCGNLMGV
AIALILGGPGAIFWMWLAALIGMATAFAESTLAQLYKIRDDRGNACGGPAWYMANGLGLRWMGTLFTLFLLAGYGGFFSA
VQANAITLSAQQLSGMGRWPITLALLILSAAAIFGGLRAIARLTQWLVPIIGIIYLLLAGWVVVHHWRQLATVAALVFNS
AFGLPEAASGLVGYGLAQAIFQGVQRGLFSNEAGTGSAPNIAAAAAPWPPHPASQGYIQMLAVFIDTLVICSATAAIILT
SGTLEHAHADLHGIALINQALATVTGHWSMPLLMALVFVFSFAAIIGNYAYAESSLRFFVLQPMKLKWLLRLLTLTMILF
GCVAEVSVVWRLADLAMGLMTITNLIALLLLSPVVLMLANDYNSQRAIGKLPTFYAVNFPAIAPQLAPDLWGRPTASHQE
SSSTAAPKPLDR

Sequences:

>Translated_492_residues
MAELLNFINNLLRDSLLIYLLLGTSIWFTLRTGFIQIRHFCHTFTILKDSGTRGGGGISPFQALCTSLAARIGCGNLMGV
AIALILGGPGAIFWMWLAALIGMATAFAESTLAQLYKIRDDRGNACGGPAWYMANGLGLRWMGTLFTLFLLAGYGGFFSA
VQANAITLSAQQLSGMGRWPITLALLILSAAAIFGGLRAIARLTQWLVPIIGIIYLLLAGWVVVHHWRQLATVAALVFNS
AFGLPEAASGLVGYGLAQAIFQGVQRGLFSNEAGTGSAPNIAAAAAPWPPHPASQGYIQMLAVFIDTLVICSATAAIILT
SGTLEHAHADLHGIALINQALATVTGHWSMPLLMALVFVFSFAAIIGNYAYAESSLRFFVLQPMKLKWLLRLLTLTMILF
GCVAEVSVVWRLADLAMGLMTITNLIALLLLSPVVLMLANDYNSQRAIGKLPTFYAVNFPAIAPQLAPDLWGRPTASHQE
SSSTAAPKPLDR
>Mature_491_residues
AELLNFINNLLRDSLLIYLLLGTSIWFTLRTGFIQIRHFCHTFTILKDSGTRGGGGISPFQALCTSLAARIGCGNLMGVA
IALILGGPGAIFWMWLAALIGMATAFAESTLAQLYKIRDDRGNACGGPAWYMANGLGLRWMGTLFTLFLLAGYGGFFSAV
QANAITLSAQQLSGMGRWPITLALLILSAAAIFGGLRAIARLTQWLVPIIGIIYLLLAGWVVVHHWRQLATVAALVFNSA
FGLPEAASGLVGYGLAQAIFQGVQRGLFSNEAGTGSAPNIAAAAAPWPPHPASQGYIQMLAVFIDTLVICSATAAIILTS
GTLEHAHADLHGIALINQALATVTGHWSMPLLMALVFVFSFAAIIGNYAYAESSLRFFVLQPMKLKWLLRLLTLTMILFG
CVAEVSVVWRLADLAMGLMTITNLIALLLLSPVVLMLANDYNSQRAIGKLPTFYAVNFPAIAPQLAPDLWGRPTASHQES
SSTAAPKPLDR

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=474, Percent_Identity=50.210970464135, Blast_Score=402, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 52632; Mature: 52501

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELLNFINNLLRDSLLIYLLLGTSIWFTLRTGFIQIRHFCHTFTILKDSGTRGGGGISP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCH
FQALCTSLAARIGCGNLMGVAIALILGGPGAIFWMWLAALIGMATAFAESTLAQLYKIRD
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DRGNACGGPAWYMANGLGLRWMGTLFTLFLLAGYGGFFSAVQANAITLSAQQLSGMGRWP
CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEHHHHCCCCCHH
ITLALLILSAAAIFGGLRAIARLTQWLVPIIGIIYLLLAGWVVVHHWRQLATVAALVFNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFGLPEAASGLVGYGLAQAIFQGVQRGLFSNEAGTGSAPNIAAAAAPWPPHPASQGYIQM
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
LAVFIDTLVICSATAAIILTSGTLEHAHADLHGIALINQALATVTGHWSMPLLMALVFVF
HHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
SFAAIIGNYAYAESSLRFFVLQPMKLKWLLRLLTLTMILFGCVAEVSVVWRLADLAMGLM
HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TITNLIALLLLSPVVLMLANDYNSQRAIGKLPTFYAVNFPAIAPQLAPDLWGRPTASHQE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEECCCHHCHHHCHHHCCCCCCCCCC
SSSTAAPKPLDR
CCCCCCCCCCCC
>Mature Secondary Structure 
AELLNFINNLLRDSLLIYLLLGTSIWFTLRTGFIQIRHFCHTFTILKDSGTRGGGGISP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCH
FQALCTSLAARIGCGNLMGVAIALILGGPGAIFWMWLAALIGMATAFAESTLAQLYKIRD
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DRGNACGGPAWYMANGLGLRWMGTLFTLFLLAGYGGFFSAVQANAITLSAQQLSGMGRWP
CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEHHHHCCCCCHH
ITLALLILSAAAIFGGLRAIARLTQWLVPIIGIIYLLLAGWVVVHHWRQLATVAALVFNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFGLPEAASGLVGYGLAQAIFQGVQRGLFSNEAGTGSAPNIAAAAAPWPPHPASQGYIQM
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
LAVFIDTLVICSATAAIILTSGTLEHAHADLHGIALINQALATVTGHWSMPLLMALVFVF
HHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
SFAAIIGNYAYAESSLRFFVLQPMKLKWLLRLLTLTMILFGCVAEVSVVWRLADLAMGLM
HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TITNLIALLLLSPVVLMLANDYNSQRAIGKLPTFYAVNFPAIAPQLAPDLWGRPTASHQE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEECCCHHCHHHCHHHCCCCCCCCCC
SSSTAAPKPLDR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]