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The map label for this gene is yaaA [C]

Identifier: 85058385

GI number: 85058385

Start: 720687

End: 721466

Strand: Reverse

Name: yaaA [C]

Synonym: SG0407

Alternate gene names: 85058385

Gene position: 721466-720687 (Counterclockwise)

Preceding gene: 85058386

Following gene: 85058381

Centisome position: 17.3

GC content: 56.79

Gene sequence:

>780_bases
ATGCTGATTGTTATTTCTCCGGCGAAAACGCTGGATTTTCAGAGTCCTCTGGCAACCCGGCGCTACACGCAGCCCGAATT
ACTGCCTCAGTCGGCGGCGCTTATCGATCTGTGCCGGAAGCTGACGCCGGCGCGTATCAGCACCCTGATGGGGATTAGCG
ATAAATTGGCTGATCTGAACGCCGCGCGCTTTCAGGCCTGGCAGACGCCGTTCACTCCCGACAATGCGCGACAGGCGATA
TTAGCCTTCAAGGGGGATGTTTATACCGGGCTGGCGGCGGAGACCTTCAGCGAAGCGCAATTCGATTTTGCCCAACGTCA
CCTGCGGATGTTGTCTGGGCTATACGGCGTACTGCGTCCGCTGGATCTGATGCAGCCTTACAGGCTGGAGATGGGGATCC
GCCTGGCTAATCCGGCCGGGGCCTCTTTGTATCACTATTGGGGCACTATGCTCACCGACAAACTCAACCAGGCGCTGGCG
GAACAGGGCGATACCTTAGTGATTAATCTGGCTTCGGACGAGTATTTCCGCGCGGTGCAGCCGGCGCGGATTAACGGGCG
GGTCATCAAACCAGTGTTTCTGGATGAAAAAAACGGCCAGTACAAGGTGATCAGTTTTAACGCCAAAAAAGCCCGCGGCA
TGATGAGCCGCTGCATCATCACCGAAGCGTTGACACAGCCAGAGCAGCTGAAGGCCTTTGATGCGGGCGGTTATCGATTC
GACGCCGCGGCCTCCAGCGACAATGAATGGGTATTCAAACGACTGCAGCAGGACGGTTAA

Upstream 100 bases:

>100_bases
AGGAAAGCAGCAGCACGGCAGCGCCCAAACCCCTTGACCGTTAACGCGCCGCCGCGACATAACCGGCGCCCGTCTTTTTT
CGCGACAACAGGAATTTGCA

Downstream 100 bases:

>100_bases
CGCCGCAGCCAAAGACCGCCGGTGGCGCGCTCATGCGCGGCCGCGACGCTGACCGACACTAGCGTCAGCCGACATGCCAT
CCGCCGGCCAGGGACGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLIVISPAKTLDFQSPLATRRYTQPELLPQSAALIDLCRKLTPARISTLMGISDKLADLNAARFQAWQTPFTPDNARQAI
LAFKGDVYTGLAAETFSEAQFDFAQRHLRMLSGLYGVLRPLDLMQPYRLEMGIRLANPAGASLYHYWGTMLTDKLNQALA
EQGDTLVINLASDEYFRAVQPARINGRVIKPVFLDEKNGQYKVISFNAKKARGMMSRCIITEALTQPEQLKAFDAGGYRF
DAAASSDNEWVFKRLQQDG

Sequences:

>Translated_259_residues
MLIVISPAKTLDFQSPLATRRYTQPELLPQSAALIDLCRKLTPARISTLMGISDKLADLNAARFQAWQTPFTPDNARQAI
LAFKGDVYTGLAAETFSEAQFDFAQRHLRMLSGLYGVLRPLDLMQPYRLEMGIRLANPAGASLYHYWGTMLTDKLNQALA
EQGDTLVINLASDEYFRAVQPARINGRVIKPVFLDEKNGQYKVISFNAKKARGMMSRCIITEALTQPEQLKAFDAGGYRF
DAAASSDNEWVFKRLQQDG
>Mature_259_residues
MLIVISPAKTLDFQSPLATRRYTQPELLPQSAALIDLCRKLTPARISTLMGISDKLADLNAARFQAWQTPFTPDNARQAI
LAFKGDVYTGLAAETFSEAQFDFAQRHLRMLSGLYGVLRPLDLMQPYRLEMGIRLANPAGASLYHYWGTMLTDKLNQALA
EQGDTLVINLASDEYFRAVQPARINGRVIKPVFLDEKNGQYKVISFNAKKARGMMSRCIITEALTQPEQLKAFDAGGYRF
DAAASSDNEWVFKRLQQDG

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=257, Percent_Identity=71.2062256809339, Blast_Score=378, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y407_SODGM (Q2NVZ3)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_454087.1
- STRING:   Q2NVZ3
- GeneID:   3867576
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG0407
- NMPDR:   fig|343509.6.peg.956
- eggNOG:   COG3022
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- PhylomeDB:   Q2NVZ3
- BioCyc:   SGLO343509:SG0407-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 28988; Mature: 28988

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVISPAKTLDFQSPLATRRYTQPELLPQSAALIDLCRKLTPARISTLMGISDKLADLN
CEEEECCCCCCCCCCCHHHHCCCCCHHCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHCC
AARFQAWQTPFTPDNARQAILAFKGDVYTGLAAETFSEAQFDFAQRHLRMLSGLYGVLRP
HHHHHHCCCCCCCCHHHHEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGIRLANPAGASLYHYWGTMLTDKLNQALAEQGDTLVINLASDEYFRAVQ
HHHCCCHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCC
PARINGRVIKPVFLDEKNGQYKVISFNAKKARGMMSRCIITEALTQPEQLKAFDAGGYRF
CCCCCCEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHEECCCCEEE
DAAASSDNEWVFKRLQQDG
ECCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLIVISPAKTLDFQSPLATRRYTQPELLPQSAALIDLCRKLTPARISTLMGISDKLADLN
CEEEECCCCCCCCCCCHHHHCCCCCHHCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHCC
AARFQAWQTPFTPDNARQAILAFKGDVYTGLAAETFSEAQFDFAQRHLRMLSGLYGVLRP
HHHHHHCCCCCCCCHHHHEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGIRLANPAGASLYHYWGTMLTDKLNQALAEQGDTLVINLASDEYFRAVQ
HHHCCCHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCC
PARINGRVIKPVFLDEKNGQYKVISFNAKKARGMMSRCIITEALTQPEQLKAFDAGGYRF
CCCCCCEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHEECCCCEEE
DAAASSDNEWVFKRLQQDG
ECCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA