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The map label for this gene is yqjA [H]

Identifier: 85058208

GI number: 85058208

Start: 417869

End: 418540

Strand: Reverse

Name: yqjA [H]

Synonym: SG0230

Alternate gene names: 85058208

Gene position: 418540-417869 (Counterclockwise)

Preceding gene: 85058211

Following gene: 85058205

Centisome position: 10.03

GC content: 52.83

Gene sequence:

>672_bases
ATGGATATTTTTAAGGAACTGTTGCACGCCCTCTGGCAGCAGGATTTTGAAACGCTTTCCGATCCAAGTTTGGTTTGGAC
CATTTATTTGCTGGTGTTTGTCATCCTTTTTTTGGAAAACGGTCTTTTGCCCGCCGCCTTTCTACCCGGCGATAGTTTAC
TCATATTGCTCGGCGTGCTGATCGCCAAGGGGACGCTGAATTTTCCTCTGGTGCTGGTGCTTCTAACCGTCGCCGCCAGC
CTGGGCAGTTGGATAAGTTATCTACAGGGGAAATGGCTGGAGAACAACCGGGTGGTGAAAAGCTGGCTGGCCCATTTGCC
GGCGCACTACCATCAGCGGGCGCACCGGATGTTTCATCGCCACGGGTTGTCGGCTTTGCTTATAGGTCGCTTTATCGCGT
TTGTGCGCACGCTGCTGCCGACCATTGCCGGCTTGTCCGGCCTGAGCAGTTCGCGTTTCCAGTTTTTCAATTGGATCAGC
GCCTTCCTGTGGGTTTTTATCTTGACGCTGGTGGGGTTCATCCTCGGCAAAACACCTGTCTTTCAGCGTTATGAAGAGGA
ATTGATGCTATGTCTGATGCTGCTGCCGCTGGCGCTGCTGACGATAGGACTGGTGAGTTCGCTGGTCGTCATCTGGCGCC
GCAAACGGCTTACCGATTCGGATAAAGAATAA

Upstream 100 bases:

>100_bases
GCGACCACGCAGAAGCGCCAACGCTAATATACCCGCTTCTTCTTTTCCGACTCGGCGGCGGGCAGCAGCATAATATGCCG
TCATTGGTTGAGAATACACA

Downstream 100 bases:

>100_bases
TGAAAGAGTCAGGTTGTGTTGGCTTTATTAAGCGCTTTCGCCTCGGTCTGCTGGCCGTGGCCGTGCTGGTGTCGCTGACG
CTTTTATTGCCGACCCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MDIFKELLHALWQQDFETLSDPSLVWTIYLLVFVILFLENGLLPAAFLPGDSLLILLGVLIAKGTLNFPLVLVLLTVAAS
LGSWISYLQGKWLENNRVVKSWLAHLPAHYHQRAHRMFHRHGLSALLIGRFIAFVRTLLPTIAGLSGLSSSRFQFFNWIS
AFLWVFILTLVGFILGKTPVFQRYEEELMLCLMLLPLALLTIGLVSSLVVIWRRKRLTDSDKE

Sequences:

>Translated_223_residues
MDIFKELLHALWQQDFETLSDPSLVWTIYLLVFVILFLENGLLPAAFLPGDSLLILLGVLIAKGTLNFPLVLVLLTVAAS
LGSWISYLQGKWLENNRVVKSWLAHLPAHYHQRAHRMFHRHGLSALLIGRFIAFVRTLLPTIAGLSGLSSSRFQFFNWIS
AFLWVFILTLVGFILGKTPVFQRYEEELMLCLMLLPLALLTIGLVSSLVVIWRRKRLTDSDKE
>Mature_223_residues
MDIFKELLHALWQQDFETLSDPSLVWTIYLLVFVILFLENGLLPAAFLPGDSLLILLGVLIAKGTLNFPLVLVLLTVAAS
LGSWISYLQGKWLENNRVVKSWLAHLPAHYHQRAHRMFHRHGLSALLIGRFIAFVRTLLPTIAGLSGLSSSRFQFFNWIS
AFLWVFILTLVGFILGKTPVFQRYEEELMLCLMLLPLALLTIGLVSSLVVIWRRKRLTDSDKE

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1789481, Length=215, Percent_Identity=69.7674418604651, Blast_Score=305, Evalue=1e-84,
Organism=Escherichia coli, GI1789384, Length=215, Percent_Identity=57.6744186046512, Blast_Score=247, Evalue=3e-67,
Organism=Escherichia coli, GI1788656, Length=192, Percent_Identity=31.25, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1786252, Length=154, Percent_Identity=31.8181818181818, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25415; Mature: 25415

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFKELLHALWQQDFETLSDPSLVWTIYLLVFVILFLENGLLPAAFLPGDSLLILLGVL
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHH
IAKGTLNFPLVLVLLTVAASLGSWISYLQGKWLENNRVVKSWLAHLPAHYHQRAHRMFHR
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
HGLSALLIGRFIAFVRTLLPTIAGLSGLSSSRFQFFNWISAFLWVFILTLVGFILGKTPV
HCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FQRYEEELMLCLMLLPLALLTIGLVSSLVVIWRRKRLTDSDKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDIFKELLHALWQQDFETLSDPSLVWTIYLLVFVILFLENGLLPAAFLPGDSLLILLGVL
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHH
IAKGTLNFPLVLVLLTVAASLGSWISYLQGKWLENNRVVKSWLAHLPAHYHQRAHRMFHR
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
HGLSALLIGRFIAFVRTLLPTIAGLSGLSSSRFQFFNWISAFLWVFILTLVGFILGKTPV
HCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FQRYEEELMLCLMLLPLALLTIGLVSSLVVIWRRKRLTDSDKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]