| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yhbP [C]
Identifier: 85058170
GI number: 85058170
Start: 367475
End: 367909
Strand: Reverse
Name: yhbP [C]
Synonym: SG0192
Alternate gene names: 85058170
Gene position: 367909-367475 (Counterclockwise)
Preceding gene: 85058172
Following gene: 85058166
Centisome position: 8.82
GC content: 56.09
Gene sequence:
>435_bases ATGGATGATCAATTGGAGGCCATTTGCCTCTTTATCAACAAACAGCACGTACTGACGTTGTGCGCCGGCAACATGGACGA TCTCTGGTGCGCCAATTGCTTTTATGTGTTTCACCCGCCGGCGATGGCGCTATGGCTGCTAACCTCGACACAAACCCGCC ACGGCGAACTGATGCGGCAAAACGCGCGGGTAGCGGGAACCATTGCACCCCATCCGAAAACGGTGGTGCTTATCAAAGGT GTGCAGTACCGCGGCGTTATCACCTGTCTGGAGGGCGAGGCCGAACGGCAGGCGCGTGGTCACTACTATCATCGCTTCCC GCTGGCCAAAGCAATGCCCTACCCGCTCTGGCAACTGGATCTACTGGAGGTAAAAATGACCGACAATACGCTGGGCTTTG GCAAGAAATTACGCTGGCAGCGGGAAACGTCCTGA
Upstream 100 bases:
>100_bases GCCTTGATGCACGATCTGGGCCGCAGAATTAAGCGGCAAGCGCGAAATAGACCGCCGACGTTCGGCGGCGGGAGCTATCA CAATCCGGAGTTCAACCGCA
Downstream 100 bases:
>100_bases GATTTGCGACCCGCCGCTGTTTTCCGCTACGGGCCCCTCTGGCCGCTGCGTTAGGGTACGTCACGCCCCGCCGCCGGAGC TGACATGTTGCGTTATCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MDDQLEAICLFINKQHVLTLCAGNMDDLWCANCFYVFHPPAMALWLLTSTQTRHGELMRQNARVAGTIAPHPKTVVLIKG VQYRGVITCLEGEAERQARGHYYHRFPLAKAMPYPLWQLDLLEVKMTDNTLGFGKKLRWQRETS
Sequences:
>Translated_144_residues MDDQLEAICLFINKQHVLTLCAGNMDDLWCANCFYVFHPPAMALWLLTSTQTRHGELMRQNARVAGTIAPHPKTVVLIKG VQYRGVITCLEGEAERQARGHYYHRFPLAKAMPYPLWQLDLLEVKMTDNTLGFGKKLRWQRETS >Mature_144_residues MDDQLEAICLFINKQHVLTLCAGNMDDLWCANCFYVFHPPAMALWLLTSTQTRHGELMRQNARVAGTIAPHPKTVVLIKG VQYRGVITCLEGEAERQARGHYYHRFPLAKAMPYPLWQLDLLEVKMTDNTLGFGKKLRWQRETS
Specific function: Unknown
COG id: COG3787
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0306 family [H]
Homologues:
Organism=Escherichia coli, GI1789544, Length=142, Percent_Identity=47.1830985915493, Blast_Score=144, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR011194 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16561; Mature: 16561
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDQLEAICLFINKQHVLTLCAGNMDDLWCANCFYVFHPPAMALWLLTSTQTRHGELMRQ CCCCCEEEEEEECCCEEEEEECCCCCCCEEEEEEEEECCHHHEEEEEECCCCHHHHHHHC NARVAGTIAPHPKTVVLIKGVQYRGVITCLEGEAERQARGHYYHRFPLAKAMPYPLWQLD CCEEEEEECCCCCEEEEEECCEECEEEEEECCCCHHHHCCCEEEECCHHHCCCCCCEEEE LLEVKMTDNTLGFGKKLRWQRETS EEEEEECCCCCCCCCEEEEEECCC >Mature Secondary Structure MDDQLEAICLFINKQHVLTLCAGNMDDLWCANCFYVFHPPAMALWLLTSTQTRHGELMRQ CCCCCEEEEEEECCCEEEEEECCCCCCCEEEEEEEEECCHHHEEEEEECCCCHHHHHHHC NARVAGTIAPHPKTVVLIKGVQYRGVITCLEGEAERQARGHYYHRFPLAKAMPYPLWQLD CCEEEEEECCCCCEEEEEECCEECEEEEEECCCCHHHHCCCEEEECCHHHCCCCCCEEEE LLEVKMTDNTLGFGKKLRWQRETS EEEEEECCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA