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The map label for this gene is ompX [C]

Identifier: 85058172

GI number: 85058172

Start: 375707

End: 376198

Strand: Reverse

Name: ompX [C]

Synonym: SG0194

Alternate gene names: 85058172

Gene position: 376198-375707 (Counterclockwise)

Preceding gene: 85058173

Following gene: 85058170

Centisome position: 9.02

GC content: 48.58

Gene sequence:

>492_bases
ATGAAAACACCGTTCTCTATTATCGTCTTTTCCCTATTGCTACCCGTCAAAGCGTTGGCCGATAACCATAATCTCAGCGT
CGGTTACCAGCTCAGTAATATGACAAACGATACCCATGGCAGAAGGTCGAACGATGACCGGCTGGACGGGTTTAATATCA
AATATCGCTATGAATGGGGCGAACCACTCGGCCCCATAGGCTCGCTGAGCTATATGACCGCCAACGCCTCCAGTAGCTGG
GCCGTCGCCAATAAAGTTCAAAATGATTTACGCTATAGCTACAGCGGGTTTTCGCTCACGGCAGGGCCCGTCTGGCGTTT
CAATGACTACGTCTCTGTTTATGGCGTTATCGGTATTAATTACGATGATTATTCATCTCATTTCAGAAAATCAACTTTCA
AGACCGGCGATGCGCCGGCGACAAACTATAGCCGCTCTGAGCTAAAAAAACCTCACTCGCCTATGGCGCAGGCGTACAAA
TCAACCCGGTAA

Upstream 100 bases:

>100_bases
CGATATTTACCTTAATCTTGTAAAATAAATTAGCCATTCGCTACCCTAGTCATCTGTCGGCGCCTAATTTAAAAAGGAAT
TTTTCATAAGGGATTCATTT

Downstream 100 bases:

>100_bases
TATGGTCATCGACCTGGGTTATGAAGCCAGCCGCTTCAACCATGGCGAGCAAACCCTAACACTAAACTCACTGCTGGTCG
GTGTCGGCTATCGTTTCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Virulence-Related Outer Membrane Protein; PagC-Like Membrane Protein

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKTPFSIIVFSLLLPVKALADNHNLSVGYQLSNMTNDTHGRRSNDDRLDGFNIKYRYEWGEPLGPIGSLSYMTANASSSW
AVANKVQNDLRYSYSGFSLTAGPVWRFNDYVSVYGVIGINYDDYSSHFRKSTFKTGDAPATNYSRSELKKPHSPMAQAYK
STR

Sequences:

>Translated_163_residues
MKTPFSIIVFSLLLPVKALADNHNLSVGYQLSNMTNDTHGRRSNDDRLDGFNIKYRYEWGEPLGPIGSLSYMTANASSSW
AVANKVQNDLRYSYSGFSLTAGPVWRFNDYVSVYGVIGINYDDYSSHFRKSTFKTGDAPATNYSRSELKKPHSPMAQAYK
STR
>Mature_163_residues
MKTPFSIIVFSLLLPVKALADNHNLSVGYQLSNMTNDTHGRRSNDDRLDGFNIKYRYEWGEPLGPIGSLSYMTANASSSW
AVANKVQNDLRYSYSGFSLTAGPVWRFNDYVSVYGVIGINYDDYSSHFRKSTFKTGDAPATNYSRSELKKPHSPMAQAYK
STR

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787034, Length=120, Percent_Identity=32.5, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18344; Mature: 18344

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00694 ENT_VIR_OMP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPFSIIVFSLLLPVKALADNHNLSVGYQLSNMTNDTHGRRSNDDRLDGFNIKYRYEWG
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECC
EPLGPIGSLSYMTANASSSWAVANKVQNDLRYSYSGFSLTAGPVWRFNDYVSVYGVIGIN
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHEECCCCEEECCCCEEECCEEEEEEEEECC
YDDYSSHFRKSTFKTGDAPATNYSRSELKKPHSPMAQAYKSTR
CCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKTPFSIIVFSLLLPVKALADNHNLSVGYQLSNMTNDTHGRRSNDDRLDGFNIKYRYEWG
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECC
EPLGPIGSLSYMTANASSSWAVANKVQNDLRYSYSGFSLTAGPVWRFNDYVSVYGVIGIN
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHEECCCCEEECCCCEEECCEEEEEEEEECC
YDDYSSHFRKSTFKTGDAPATNYSRSELKKPHSPMAQAYKSTR
CCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA