| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85058162
Identifier: 85058162
GI number: 85058162
Start: 349791
End: 350318
Strand: Reverse
Name: 85058162
Synonym: SG0184
Alternate gene names: NA
Gene position: 350318-349791 (Counterclockwise)
Preceding gene: 85058166
Following gene: 85058160
Centisome position: 8.4
GC content: 55.11
Gene sequence:
>528_bases ATGAAAAAATCTTACGCTGTTGCCGCCTGCCTGCTCTGTACCCTCACGTTAGCTCCCGCCGTCAAAGCAGCGGACGAGAC GCCACAGTTTCGCTGCAAGCCGGGCGAAACCTATTACATGAATGTCATGAACACCGGCGTGGAATATTGGTTCCCGGTGT ACGAGATGTTTAAACAGGCCTCCCATCAATTGGGATGTAAAACCGTTTACGGCGGCACGCCGGCCTACTATGTCAACCAA CAGTTGTCCAGTTTCGAGCAGGTGCTGGCGCAAAAACTCGCCGGCATCTTTCTCCATCCCATAAACCCTGATCCCTTTAT TGAACCGATCAATCGCGCCGCAGAGATGGGCATTCCGGTCGTCACCTTCGCCGCCGATTCCCCCAATAGCAAACGCGTTG CCTATGTGACCTCGGACAACTTCCGCGAAGGCAAGCGGCCGTGGACGAAATGGGCAAGGTTATGCAGGGGAAAGGCGAGT ATACCGTGCTGGAGAATCCGGGTCAGGATAACCACGATCGCCGCGTGA
Upstream 100 bases:
>100_bases ATCGATGAAATAAATTTCAAAACCACCCCGGCTCGTTTCTCCGTGTTGCTGCTGTAACGGCTGAGCCAGGAATACCAGAC GTTTTCCGGGGAAGATAATA
Downstream 100 bases:
>100_bases TTGCCTTCATCAACGAGATGAAAACCGCTTTCTCGGACACCAAACTGGTGGCGCTGGTGGCGACCAACCAGGATCCGTCG AAAGTCTATAACGCCGTATT
Product: putative sugar ABC transporter periplasmic component
Products: NA
Alternate protein names: Sugar ABC Transporter Periplasmic Component; Ribose ABC Transporter; Tat Pathway Signal Sequence Domain-Containing; ABC-Type Sugar Transport System Periplasmic Component
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKKSYAVAACLLCTLTLAPAVKAADETPQFRCKPGETYYMNVMNTGVEYWFPVYEMFKQASHQLGCKTVYGGTPAYYVNQ QLSSFEQVLAQKLAGIFLHPINPDPFIEPINRAAEMGIPVVTFAADSPNSKRVAYVTSDNFREGKRPWTKWARLCRGKAS IPCWRIRVRITTIAA
Sequences:
>Translated_175_residues MKKSYAVAACLLCTLTLAPAVKAADETPQFRCKPGETYYMNVMNTGVEYWFPVYEMFKQASHQLGCKTVYGGTPAYYVNQ QLSSFEQVLAQKLAGIFLHPINPDPFIEPINRAAEMGIPVVTFAADSPNSKRVAYVTSDNFREGKRPWTKWARLCRGKAS IPCWRIRVRITTIAA >Mature_175_residues MKKSYAVAACLLCTLTLAPAVKAADETPQFRCKPGETYYMNVMNTGVEYWFPVYEMFKQASHQLGCKTVYGGTPAYYVNQ QLSSFEQVLAQKLAGIFLHPINPDPFIEPINRAAEMGIPVVTFAADSPNSKRVAYVTSDNFREGKRPWTKWARLCRGKAS IPCWRIRVRITTIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19665; Mature: 19665
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSYAVAACLLCTLTLAPAVKAADETPQFRCKPGETYYMNVMNTGVEYWFPVYEMFKQA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEHHCCHHHHHHHHHHHHHH SHQLGCKTVYGGTPAYYVNQQLSSFEQVLAQKLAGIFLHPINPDPFIEPINRAAEMGIPV HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCE VTFAADSPNSKRVAYVTSDNFREGKRPWTKWARLCRGKASIPCWRIRVRITTIAA EEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEEECC >Mature Secondary Structure MKKSYAVAACLLCTLTLAPAVKAADETPQFRCKPGETYYMNVMNTGVEYWFPVYEMFKQA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEHHCCHHHHHHHHHHHHHH SHQLGCKTVYGGTPAYYVNQQLSSFEQVLAQKLAGIFLHPINPDPFIEPINRAAEMGIPV HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCE VTFAADSPNSKRVAYVTSDNFREGKRPWTKWARLCRGKASIPCWRIRVRITTIAA EEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA