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The map label for this gene is fucU [H]

Identifier: 85058157

GI number: 85058157

Start: 340337

End: 340759

Strand: Reverse

Name: fucU [H]

Synonym: SG0179

Alternate gene names: 85058157

Gene position: 340759-340337 (Counterclockwise)

Preceding gene: 85058158

Following gene: 85058156

Centisome position: 8.17

GC content: 57.21

Gene sequence:

>423_bases
ATGTTGAAAATCCTTTCTCCCCTGATCAGTCCCGATCTGCTCAAGACGCTGTCAGAGATGGGGCACGGTGATGAAATTAT
CTTTGCCGATGCCCATTTTCCGGCGCATCGTCTCAACCCGCACGTCATTCGGGCGGACGGTCTGCGCATCGCCGACTTGC
TTGCGGCGATCGCGCCGCTGTTTGCCTTGGACAGTTACGCCCCGCCGGTGGTGATGATGGCGCCAGTCGACGGCGACGTG
CTGGATCTTTCGGTAGAGCTGCGCTACCGCCAGGCACTGTTCAGCGAGAAATCTGGCGCAGCGACGGAGTGGATCAATCG
TGAAGCCTTTTATCAGCGTGCCGGGACCGCCTACGCCTTAGTGGTAACTGGGGAAGCCGTCCGCTACGGCAATATTTTGC
TGAAAAAAGGCATTACGTTTTGA

Upstream 100 bases:

>100_bases
CAGGTCAACTATCGTTACTACCGCTACTATCCCGGCGAACAGTGCGCCAATTATCAACAAATGGTGGAACAACTCGACGC
AATGACGGAAGGAGAGTGAT

Downstream 100 bases:

>100_bases
TTTTCGGGTGATTATCCGGCCCTGTGCGGCCAGCGCGAAGGATGTGTGCGGTGAAAACAACGCGTCAACAGGATCTGGTG
CAATTGCTACATCAGCACGG

Product: fucose operon protein

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLKILSPLISPDLLKTLSEMGHGDEIIFADAHFPAHRLNPHVIRADGLRIADLLAAIAPLFALDSYAPPVVMMAPVDGDV
LDLSVELRYRQALFSEKSGAATEWINREAFYQRAGTAYALVVTGEAVRYGNILLKKGITF

Sequences:

>Translated_140_residues
MLKILSPLISPDLLKTLSEMGHGDEIIFADAHFPAHRLNPHVIRADGLRIADLLAAIAPLFALDSYAPPVVMMAPVDGDV
LDLSVELRYRQALFSEKSGAATEWINREAFYQRAGTAYALVVTGEAVRYGNILLKKGITF
>Mature_140_residues
MLKILSPLISPDLLKTLSEMGHGDEIIFADAHFPAHRLNPHVIRADGLRIADLLAAIAPLFALDSYAPPVVMMAPVDGDV
LDLSVELRYRQALFSEKSGAATEWINREAFYQRAGTAYALVVTGEAVRYGNILLKKGITF

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=144, Percent_Identity=43.75, Blast_Score=100, Evalue=6e-22,
Organism=Homo sapiens, GI148596951, Length=130, Percent_Identity=43.0769230769231, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1789169, Length=139, Percent_Identity=66.9064748201439, Blast_Score=190, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 15335; Mature: 15335

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKILSPLISPDLLKTLSEMGHGDEIIFADAHFPAHRLNPHVIRADGLRIADLLAAIAPL
CCCHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHCCCEEEEECCCHHHHHHHHHHHH
FALDSYAPPVVMMAPVDGDVLDLSVELRYRQALFSEKSGAATEWINREAFYQRAGTAYAL
HHHCCCCCCEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEE
VVTGEAVRYGNILLKKGITF
EEECCCEECCCEEEECCCCC
>Mature Secondary Structure
MLKILSPLISPDLLKTLSEMGHGDEIIFADAHFPAHRLNPHVIRADGLRIADLLAAIAPL
CCCHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHCCCEEEEECCCHHHHHHHHHHHH
FALDSYAPPVVMMAPVDGDVLDLSVELRYRQALFSEKSGAATEWINREAFYQRAGTAYAL
HHHCCCCCCEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEE
VVTGEAVRYGNILLKKGITF
EEECCCEECCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA