| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yhhL [H]
Identifier: 85058060
GI number: 85058060
Start: 129363
End: 129653
Strand: Reverse
Name: yhhL [H]
Synonym: SG0082
Alternate gene names: 85058060
Gene position: 129653-129363 (Counterclockwise)
Preceding gene: 85058061
Following gene: 85058058
Centisome position: 3.11
GC content: 51.2
Gene sequence:
>291_bases ATGATACTGATTAATCTGGGCCGCCTGTTGATGCTGGTGGTGTGGAGCTTTTTGTTATTTAACCTGATACAGCCGTTTCC GAAGCCGCTGAAATATTTTCTCGATATTGGCCTGTTCTTTATGGTGGTGATGCATGCGTTGCAGCTAACGCTGCAGAAAG CCACGCTGACCAAAGACGAGGCCAAGCCTGGCGCCGCTTTTCAAACGCGGGTTTTCCTTTTCGGCGTATTTGAAATGGTC GCCTGGCAGAAAAAACAGCGAGCGCAGCGCCTCTCCGATCGCGGCCGTTAA
Upstream 100 bases:
>100_bases GCTCCCGAGGTGCCGGCCCATTGGCAGCTACATCGGGAAAAAATTGCCGGTCAAATCTCCTACCGGCTCTATATCCGTCA CGCTACGCCGGAGAAACAAC
Downstream 100 bases:
>100_bases CCGCCCGGCGAAATCCCGCCTGCGCAGTAACGGCCCGGCGGCGGGAATGAGAGTGTCAGGGCACGCACCCGGCTTATCAG GGTTTCTTACCGGGCAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MILINLGRLLMLVVWSFLLFNLIQPFPKPLKYFLDIGLFFMVVMHALQLTLQKATLTKDEAKPGAAFQTRVFLFGVFEMV AWQKKQRAQRLSDRGR
Sequences:
>Translated_96_residues MILINLGRLLMLVVWSFLLFNLIQPFPKPLKYFLDIGLFFMVVMHALQLTLQKATLTKDEAKPGAAFQTRVFLFGVFEMV AWQKKQRAQRLSDRGR >Mature_96_residues MILINLGRLLMLVVWSFLLFNLIQPFPKPLKYFLDIGLFFMVVMHALQLTLQKATLTKDEAKPGAAFQTRVFLFGVFEMV AWQKKQRAQRLSDRGR
Specific function: Unknown
COG id: COG3776
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789876, Length=89, Percent_Identity=53.9325842696629, Blast_Score=106, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009525 [H]
Pfam domain/function: PF06611 DUF1145 [H]
EC number: NA
Molecular weight: Translated: 11202; Mature: 11202
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILINLGRLLMLVVWSFLLFNLIQPFPKPLKYFLDIGLFFMVVMHALQLTLQKATLTKDE CEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AKPGAAFQTRVFLFGVFEMVAWQKKQRAQRLSDRGR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILINLGRLLMLVVWSFLLFNLIQPFPKPLKYFLDIGLFFMVVMHALQLTLQKATLTKDE CEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AKPGAAFQTRVFLFGVFEMVAWQKKQRAQRLSDRGR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3025556; 8041620; 9278503 [H]