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The map label for this gene is fliR

Identifier: 85058019

GI number: 85058019

Start: 60611

End: 61399

Strand: Reverse

Name: fliR

Synonym: SG0041

Alternate gene names: 85058019

Gene position: 61399-60611 (Counterclockwise)

Preceding gene: 85058020

Following gene: 85058007

Centisome position: 1.47

GC content: 59.06

Gene sequence:

>789_bases
ATGCTGGACTTGACCGCCCTGCCGAGCGCCATCGGCCCGCATTTCTGGCCGCTGGCGCGTTTACTGGGGCTTTTTGTCAG
CGCGCCGCTGCTCAGCGAAAAAATCATCGCGAAAAAGGTGAAAATCGGCCTGGCTGTGCTCATTACGCTGCTGATTGCCC
CCGGGCTGGAGCCGGTGGCTACCCCCCTGGTTTCCGTGGCGGGGCTGTGGCTTATCATGGCGCAGCTTCTCATTGGCGTA
ATCGTGGGGCTGACGCTACAGCTCGCCTTTAGCACCGTGCGCTTCGCCGGCGAAGTGATCGGTTTGCAGATGGGACTCTC
GTTCGCCACCTTTTTCGACCCCTTTAGCGGGCCGAACTCCCCCATTATTGCCCGCCTGTTAAATCTTCTGTTGCTCTTGC
TGTTCCTCTCTCTCGACGCTCACCTGGTCATGATTGATGCCCTGGTCGACAGTTTTCAACTGCTCCCTATCGCGCCGCTG
CCGCTTAACGGCGAAAGTTTCCTGGCGCTGGCGCGCGCCGTCGGCCTGTTGTTTTCCTGCGGTCTGATGCTGGCGCTGCC
GGCAATGACGCTGCTGCTGTTGCTCAATATTACCCTGGGGGTGCTGAACCGATTAACACCGCAATTCTCCGTGTTTGTCA
TTGGCTTTCCTCTAACGCTCGGCGGCGGACTGCTGGCGCTGATGCTGGTCATGCCGCTGTTGGCAACCTTCGCCGAAGGG
CTATTTACCACGCTTTTTCAACATCTCTCCGCCATACTGACCACCATGGTCGGCGGCCAGCAGGCATAA

Upstream 100 bases:

>100_bases
ATCTCTCTGGTTATCGCCGGCCCCTGGATGCTCAGCCTGCTGCTGGATTATGTGCGTACGCTGTTCAGCCAGTTGCCCTA
TTCGATAGTGTAAGGAAACT

Downstream 100 bases:

>100_bases
AAAAACCGGCACGAAAACGTCTCGGCGCCGGAAGTAGCCTAAGCGGATACTTACTTGATTTTGTTGAATAACGACAGTTC
ATTCATCATCTGAAAGACCA

Product: flagellar biosynthesis protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MLDLTALPSAIGPHFWPLARLLGLFVSAPLLSEKIIAKKVKIGLAVLITLLIAPGLEPVATPLVSVAGLWLIMAQLLIGV
IVGLTLQLAFSTVRFAGEVIGLQMGLSFATFFDPFSGPNSPIIARLLNLLLLLLFLSLDAHLVMIDALVDSFQLLPIAPL
PLNGESFLALARAVGLLFSCGLMLALPAMTLLLLLNITLGVLNRLTPQFSVFVIGFPLTLGGGLLALMLVMPLLATFAEG
LFTTLFQHLSAILTTMVGGQQA

Sequences:

>Translated_262_residues
MLDLTALPSAIGPHFWPLARLLGLFVSAPLLSEKIIAKKVKIGLAVLITLLIAPGLEPVATPLVSVAGLWLIMAQLLIGV
IVGLTLQLAFSTVRFAGEVIGLQMGLSFATFFDPFSGPNSPIIARLLNLLLLLLFLSLDAHLVMIDALVDSFQLLPIAPL
PLNGESFLALARAVGLLFSCGLMLALPAMTLLLLLNITLGVLNRLTPQFSVFVIGFPLTLGGGLLALMLVMPLLATFAEG
LFTTLFQHLSAILTTMVGGQQA
>Mature_262_residues
MLDLTALPSAIGPHFWPLARLLGLFVSAPLLSEKIIAKKVKIGLAVLITLLIAPGLEPVATPLVSVAGLWLIMAQLLIGV
IVGLTLQLAFSTVRFAGEVIGLQMGLSFATFFDPFSGPNSPIIARLLNLLLLLLFLSLDAHLVMIDALVDSFQLLPIAPL
PLNGESFLALARAVGLLFSCGLMLALPAMTLLLLLNITLGVLNRLTPQFSVFVIGFPLTLGGGLLALMLVMPLLATFAEG
LFTTLFQHLSAILTTMVGGQQA

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=243, Percent_Identity=53.4979423868313, Blast_Score=214, Evalue=7e-57,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 27696; Mature: 27696

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLTALPSAIGPHFWPLARLLGLFVSAPLLSEKIIAKKVKIGLAVLITLLIAPGLEPVA
CCCCHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
TPLVSVAGLWLIMAQLLIGVIVGLTLQLAFSTVRFAGEVIGLQMGLSFATFFDPFSGPNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PIIARLLNLLLLLLFLSLDAHLVMIDALVDSFQLLPIAPLPLNGESFLALARAVGLLFSC
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GLMLALPAMTLLLLLNITLGVLNRLTPQFSVFVIGFPLTLGGGLLALMLVMPLLATFAEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
LFTTLFQHLSAILTTMVGGQQA
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLDLTALPSAIGPHFWPLARLLGLFVSAPLLSEKIIAKKVKIGLAVLITLLIAPGLEPVA
CCCCHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
TPLVSVAGLWLIMAQLLIGVIVGLTLQLAFSTVRFAGEVIGLQMGLSFATFFDPFSGPNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PIIARLLNLLLLLLFLSLDAHLVMIDALVDSFQLLPIAPLPLNGESFLALARAVGLLFSC
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GLMLALPAMTLLLLLNITLGVLNRLTPQFSVFVIGFPLTLGGGLLALMLVMPLLATFAEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
LFTTLFQHLSAILTTMVGGQQA
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412685; 7934865 [H]