Click here to switch to the map view.

The map label for this gene is flgA [H]

Identifier: 85058007

GI number: 85058007

Start: 49511

End: 50227

Strand: Reverse

Name: flgA [H]

Synonym: SG0029

Alternate gene names: 85058007

Gene position: 50227-49511 (Counterclockwise)

Preceding gene: 85058019

Following gene: 85058006

Centisome position: 1.2

GC content: 60.11

Gene sequence:

>717_bases
ATGAAAGGACTAACGTCTTCTTGGTGGAAACCATTAAGTCAGCTATGCCTTTTTTTATTTCCTTTATCCGCCGCGGCAGA
AAGTGGCGACGCGTTAGTGACGCGGCTGGAATCACTATTACGCCAGCAGCGCCCGGATCGTTCTCTTGTGCAGAAAGTCA
CGCTCATCACGCCGGCGCGACTGTTGCCGGACTGCCCGTCGCCGCAATTACAATTGGCAAGCTATGGTCGTCTGAGCGGC
AATATGAGCGTTACCGCCCGCTGCGGCGCGCGGCGATATTTTTTGCAAATCAAGGTTAGCGCCCGCGGCGATTATTGGGT
GGCGGCCCGCGGCCTGCCCTCGGGGACCGCCCTTGGCAGCAAGAATGTCGCACGGGAAAACGGGGAGCTGGCCGGTCAGC
CGCGCAATGTGATATTCGCGACGCAACCGGTGACCGGCTCGCTCACGACCCGTGCGATTCAAGCCGGTCAGCCGCTGACG
GCCAATATGCTGCGCGCGCCCTGGAAAGTCCGCCAGGGCAATCCGGTGGCGGTCGTCAGCCGTGGACCTGGTTTTCAAGT
TCGCCATTATGGCAAGGCCATGAGCGATGCCGCGGTCGGGGATGCGCTGCGGGTACGTCTGGCGTCAGGCCAAATGGTCA
GCGGCGCGGTCGATAATCAGGGCGTGGTGTTGCAAAATGCACTCCCTTTCTCAAGTTTTACCGCGCCGGTCCGATAA

Upstream 100 bases:

>100_bases
TCGCCGTTTATTTAGCCTTATAATTCTTACGCGCTGTTTCTATACTTACTCCCCATATTACGGCAGCCGTTAACAATGGG
ACGACACTAGGGAAAATACT

Downstream 100 bases:

>100_bases
GCAGAACAGTAAGCCGTCCCATTCTCAGGCGAGGAGTGAACTATGAGCATAGAACGCACATTACCCGCGCATGCCATCAT
GGCGGTGGTGAATGACCTGC

Product: flagellar basal body P-ring formation protein FlgA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKGLTSSWWKPLSQLCLFLFPLSAAAESGDALVTRLESLLRQQRPDRSLVQKVTLITPARLLPDCPSPQLQLASYGRLSG
NMSVTARCGARRYFLQIKVSARGDYWVAARGLPSGTALGSKNVARENGELAGQPRNVIFATQPVTGSLTTRAIQAGQPLT
ANMLRAPWKVRQGNPVAVVSRGPGFQVRHYGKAMSDAAVGDALRVRLASGQMVSGAVDNQGVVLQNALPFSSFTAPVR

Sequences:

>Translated_238_residues
MKGLTSSWWKPLSQLCLFLFPLSAAAESGDALVTRLESLLRQQRPDRSLVQKVTLITPARLLPDCPSPQLQLASYGRLSG
NMSVTARCGARRYFLQIKVSARGDYWVAARGLPSGTALGSKNVARENGELAGQPRNVIFATQPVTGSLTTRAIQAGQPLT
ANMLRAPWKVRQGNPVAVVSRGPGFQVRHYGKAMSDAAVGDALRVRLASGQMVSGAVDNQGVVLQNALPFSSFTAPVR
>Mature_238_residues
MKGLTSSWWKPLSQLCLFLFPLSAAAESGDALVTRLESLLRQQRPDRSLVQKVTLITPARLLPDCPSPQLQLASYGRLSG
NMSVTARCGARRYFLQIKVSARGDYWVAARGLPSGTALGSKNVARENGELAGQPRNVIFATQPVTGSLTTRAIQAGQPLT
ANMLRAPWKVRQGNPVAVVSRGPGFQVRHYGKAMSDAAVGDALRVRLASGQMVSGAVDNQGVVLQNALPFSSFTAPVR

Specific function: Involved in the assembly process of the P-ring formation. It may associate with flgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly [H]

COG id: COG1261

COG function: function code NO; Flagellar basal body P-ring biosynthesis protein

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgA family [H]

Homologues:

Organism=Escherichia coli, GI1787312, Length=212, Percent_Identity=33.9622641509434, Blast_Score=107, Evalue=8e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017585
- InterPro:   IPR013974 [H]

Pfam domain/function: PF08666 SAF [H]

EC number: NA

Molecular weight: Translated: 25498; Mature: 25498

Theoretical pI: Translated: 11.70; Mature: 11.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLTSSWWKPLSQLCLFLFPLSAAAESGDALVTRLESLLRQQRPDRSLVQKVTLITPAR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHH
LLPDCPSPQLQLASYGRLSGNMSVTARCGARRYFLQIKVSARGDYWVAARGLPSGTALGS
HCCCCCCCCEEHHCCCCCCCCCEEEEECCCEEEEEEEEEECCCCEEEEECCCCCCCCCCC
KNVARENGELAGQPRNVIFATQPVTGSLTTRAIQAGQPLTANMLRAPWKVRQGNPVAVVS
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHCCEEECCCCEEEEEE
RGPGFQVRHYGKAMSDAAVGDALRVRLASGQMVSGAVDNQGVVLQNALPFSSFTAPVR
CCCCCEEHHHCCHHHHHHHCHHHEEEECCCCEEECCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKGLTSSWWKPLSQLCLFLFPLSAAAESGDALVTRLESLLRQQRPDRSLVQKVTLITPAR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHH
LLPDCPSPQLQLASYGRLSGNMSVTARCGARRYFLQIKVSARGDYWVAARGLPSGTALGS
HCCCCCCCCEEHHCCCCCCCCCEEEEECCCEEEEEEEEEECCCCEEEEECCCCCCCCCCC
KNVARENGELAGQPRNVIFATQPVTGSLTTRAIQAGQPLTANMLRAPWKVRQGNPVAVVS
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHCCEEECCCCEEEEEE
RGPGFQVRHYGKAMSDAAVGDALRVRLASGQMVSGAVDNQGVVLQNALPFSSFTAPVR
CCCCCEEHHHCCHHHHHHHCHHHEEEECCCCEEECCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA