| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is folE [H]
Identifier: 84625993
GI number: 84625993
Start: 4901874
End: 4902503
Strand: Reverse
Name: folE [H]
Synonym: XOO_4336
Alternate gene names: 84625993
Gene position: 4902503-4901874 (Counterclockwise)
Preceding gene: 84625997
Following gene: 84625992
Centisome position: 99.24
GC content: 63.81
Gene sequence:
>630_bases ATGCTCGCCCCCTTTTGGTGCACCTGCATGAGCCAGTCCGACCAGCCCGATTCCTCCGTGACCCAAACCCAGGCCGAAGA CGCCGTGCGCATCTTGTTGCGCTGGGCGGGCGAAGATCCGACGCGTGAAGGCCTGCTGGACACCCCACGCCGGGTGGCCG AAGCCTATGGCGACTGGTTCAGCGGCTACCGCATAGAACCGCGCGAATACCTGGAACGCACCTTCGAAGAAGTGGCCGGC TATGACGAACTGATCGTGCTGCGCGACATCTCGTATGAAAGCCATTGCGAGCACCACATGGCGCCGATCATCGGCAAGGT GCACGTGGGCTATCTGCCCCGCTGCAAGGTGGTCGGCATCAGCAAGCTGGCCCGCGTGGTGGAAAGCTACGCGCGCCGCT TCCAGGTGCAGGAAAAGATGACCGCACAGATCGCCCAGTGCATCCAGGACGTGCTGCAACCGCTCGGCGTGGGCGTGGTG GTGGAAGGCGCGCACGAATGCATGACCACCCGCGGCATCCACAAGCGCGGCGTCAGCATGGTGACCTCCAAGATGCTGGG CAGCTTCCGCGAAGACGCGCGCACCCGCGCCGAATTCCTGCAGTTCATCGAAGTGGGTGGCAAGCGTTGA
Upstream 100 bases:
>100_bases AACAGATAGGATGCTATCAATTCACTAATGAATCAGTAGTCGCTGAACATTTGCAAACTGGCGCAACCGACGTGGGGCAG CCGCTCAGTCCTCGGGTACC
Downstream 100 bases:
>100_bases GGTCGAGCTTGGCGTTGATGGCTGGTAGATTGATGCTCTACAAGCTGGCGGGACACCGTCGCTAAGGAATCGCATGCAGA TTGAATCTATCGAAATCAAG
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MLAPFWCTCMSQSDQPDSSVTQTQAEDAVRILLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYRIEPREYLERTFEEVAG YDELIVLRDISYESHCEHHMAPIIGKVHVGYLPRCKVVGISKLARVVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVV VEGAHECMTTRGIHKRGVSMVTSKMLGSFREDARTRAEFLQFIEVGGKR
Sequences:
>Translated_209_residues MLAPFWCTCMSQSDQPDSSVTQTQAEDAVRILLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYRIEPREYLERTFEEVAG YDELIVLRDISYESHCEHHMAPIIGKVHVGYLPRCKVVGISKLARVVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVV VEGAHECMTTRGIHKRGVSMVTSKMLGSFREDARTRAEFLQFIEVGGKR >Mature_209_residues MLAPFWCTCMSQSDQPDSSVTQTQAEDAVRILLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYRIEPREYLERTFEEVAG YDELIVLRDISYESHCEHHMAPIIGKVHVGYLPRCKVVGISKLARVVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVV VEGAHECMTTRGIHKRGVSMVTSKMLGSFREDARTRAEFLQFIEVGGKR
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=188, Percent_Identity=47.8723404255319, Blast_Score=177, Evalue=5e-45, Organism=Homo sapiens, GI4503949, Length=188, Percent_Identity=47.8723404255319, Blast_Score=177, Evalue=5e-45, Organism=Homo sapiens, GI66932970, Length=158, Percent_Identity=43.6708860759494, Blast_Score=135, Evalue=3e-32, Organism=Homo sapiens, GI66932972, Length=148, Percent_Identity=45.945945945946, Blast_Score=131, Evalue=3e-31, Organism=Escherichia coli, GI1788476, Length=175, Percent_Identity=36, Blast_Score=113, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17560486, Length=179, Percent_Identity=47.4860335195531, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6321706, Length=178, Percent_Identity=51.123595505618, Blast_Score=181, Evalue=9e-47, Organism=Drosophila melanogaster, GI24656782, Length=176, Percent_Identity=48.2954545454545, Blast_Score=157, Evalue=7e-39, Organism=Drosophila melanogaster, GI24656791, Length=176, Percent_Identity=48.2954545454545, Blast_Score=156, Evalue=1e-38, Organism=Drosophila melanogaster, GI24656796, Length=176, Percent_Identity=48.2954545454545, Blast_Score=156, Evalue=1e-38,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 23712; Mature: 23712
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAPFWCTCMSQSDQPDSSVTQTQAEDAVRILLRWAGEDPTREGLLDTPRRVAEAYGDWF CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH SGYRIEPREYLERTFEEVAGYDELIVLRDISYESHCEHHMAPIIGKVHVGYLPRCKVVGI CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH SKLARVVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVVVEGAHECMTTRGIHKRGVSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHH VTSKMLGSFREDARTRAEFLQFIEVGGKR HHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLAPFWCTCMSQSDQPDSSVTQTQAEDAVRILLRWAGEDPTREGLLDTPRRVAEAYGDWF CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH SGYRIEPREYLERTFEEVAGYDELIVLRDISYESHCEHHMAPIIGKVHVGYLPRCKVVGI CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH SKLARVVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVVVEGAHECMTTRGIHKRGVSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHH VTSKMLGSFREDARTRAEFLQFIEVGGKR HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]