Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84625992

Identifier: 84625992

GI number: 84625992

Start: 4900604

End: 4901800

Strand: Reverse

Name: 84625992

Synonym: XOO_4335

Alternate gene names: NA

Gene position: 4901800-4900604 (Counterclockwise)

Preceding gene: 84625993

Following gene: 84625991

Centisome position: 99.22

GC content: 56.47

Gene sequence:

>1197_bases
ATGCAGATTGAATCTATCGAAATCAAGAATTTCAGGCTGTTCCGCAACGCCAAGCTAACCCACGTGCCCAGGCTCTGCGT
CTTGGTTGGAGCGAACGGAACCGGCAAATCCACACTGTTCGACGTGTTCTCCTTTCTCAAGGACGCCTTGTCGATGAATG
TCGGCAAGGCGATCGCAAAGCGCGGCGGTTACAGGGAAGTCGCAAGCAGAGGGTTCGCGCACGAACCCATCGAATTTACC
CTGCAATGTCGCCTGGAGATCACTGGCAGAGAGCGTCTGGTGACCTACGTTCTGAAAATCGCGCCTGGCACTGGCACGCG
GGTGGAGATTGAGCGCGAACTGTTGCGCTACAAGCGCGGCAGTTATGGCGCGCCGTTCCGCTTCCTGGATTTCGCACACG
GCAAAGGCTACGCAATCACCAACGAAGAAGAGTTCTCCAAGAAAGACGAAGAGCTCACCCGCGAGGAGCAGGAACTCGAT
GCCCCGGATATCCTGGCGATCAAGGGCCTGGGCCAGTTCGAACGCTTCAAGGCGGCCAGCGCCTTTCGCCTGATGATTGA
AAACTGGCACGTCTCCGATTTCCATGTCTCCGAAGCAAGGCCAAGCCAGGAAGAAGGCTTTGCCGAGCATTTGTCCACGC
GCGGTGACAACCTACTGCTGGTCGCCAATTTCCTTTATGAAAACCATCGCGATCGTTTCGATCGCGTGTTGCAGGCGATG
AATCGCCGCGTGCCCGGTGTTTCGGTTGTGCAACCTCAGCAGACCCTGGATGGGCGTTTGATCCTGCGGTTTCAGGATGG
CAGCTTCAAGGACCCGTTCATCGCCAGATACGTTTCCGATGGGACGGTCAAGATGTTTGCGTATCTGGTGCTTCTCAACG
ACCCCAAGCCATACCCGTTGCTGGCAGTGGAAGAGCCCGAAAATCAACTCTATCCGGAATTGCTGCCGGAGCTGGCGGAA
GAGTTCCGCGACTATGCCAGGCGTGGCGGCCGGGTTTTCATCTCCACCCATTCACCCGATTTCCTCAACGCTTTGACGCT
AGAGGAGATTCACTGCTTGCGCAAGGAGAAGGGTTTCACCACGATCACGCGTGCCAGTGACTCGGAAAATCTACGCGCAT
TGTTCGAAGCAGGCGATCTGCCCGGATACCTTTGGAAGCAAGGCCTGTTCGAGGGCCTGAACCGGGAAGTGGCCTAA

Upstream 100 bases:

>100_bases
TTCATCGAAGTGGGTGGCAAGCGTTGAGGTCGAGCTTGGCGTTGATGGCTGGTAGATTGATGCTCTACAAGCTGGCGGGA
CACCGTCGCTAAGGAATCGC

Downstream 100 bases:

>100_bases
TGCATGGGCGCATCATTTTCTTGCTGGAACAGCCATCAATGAAGGTTCTGCTGGATGGATTACTGCCGCGTCTGTTTCCT
GGATGGCAGGAAAGCCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: SMC Domain-Containing Protein; SMC Domain Protein; ATPase-Like Protein; RecF/RecN/SMC N Terminal Domain

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MQIESIEIKNFRLFRNAKLTHVPRLCVLVGANGTGKSTLFDVFSFLKDALSMNVGKAIAKRGGYREVASRGFAHEPIEFT
LQCRLEITGRERLVTYVLKIAPGTGTRVEIERELLRYKRGSYGAPFRFLDFAHGKGYAITNEEEFSKKDEELTREEQELD
APDILAIKGLGQFERFKAASAFRLMIENWHVSDFHVSEARPSQEEGFAEHLSTRGDNLLLVANFLYENHRDRFDRVLQAM
NRRVPGVSVVQPQQTLDGRLILRFQDGSFKDPFIARYVSDGTVKMFAYLVLLNDPKPYPLLAVEEPENQLYPELLPELAE
EFRDYARRGGRVFISTHSPDFLNALTLEEIHCLRKEKGFTTITRASDSENLRALFEAGDLPGYLWKQGLFEGLNREVA

Sequences:

>Translated_398_residues
MQIESIEIKNFRLFRNAKLTHVPRLCVLVGANGTGKSTLFDVFSFLKDALSMNVGKAIAKRGGYREVASRGFAHEPIEFT
LQCRLEITGRERLVTYVLKIAPGTGTRVEIERELLRYKRGSYGAPFRFLDFAHGKGYAITNEEEFSKKDEELTREEQELD
APDILAIKGLGQFERFKAASAFRLMIENWHVSDFHVSEARPSQEEGFAEHLSTRGDNLLLVANFLYENHRDRFDRVLQAM
NRRVPGVSVVQPQQTLDGRLILRFQDGSFKDPFIARYVSDGTVKMFAYLVLLNDPKPYPLLAVEEPENQLYPELLPELAE
EFRDYARRGGRVFISTHSPDFLNALTLEEIHCLRKEKGFTTITRASDSENLRALFEAGDLPGYLWKQGLFEGLNREVA
>Mature_398_residues
MQIESIEIKNFRLFRNAKLTHVPRLCVLVGANGTGKSTLFDVFSFLKDALSMNVGKAIAKRGGYREVASRGFAHEPIEFT
LQCRLEITGRERLVTYVLKIAPGTGTRVEIERELLRYKRGSYGAPFRFLDFAHGKGYAITNEEEFSKKDEELTREEQELD
APDILAIKGLGQFERFKAASAFRLMIENWHVSDFHVSEARPSQEEGFAEHLSTRGDNLLLVANFLYENHRDRFDRVLQAM
NRRVPGVSVVQPQQTLDGRLILRFQDGSFKDPFIARYVSDGTVKMFAYLVLLNDPKPYPLLAVEEPENQLYPELLPELAE
EFRDYARRGGRVFISTHSPDFLNALTLEEIHCLRKEKGFTTITRASDSENLRALFEAGDLPGYLWKQGLFEGLNREVA

Specific function: Unknown

COG id: COG4637

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45477; Mature: 45477

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIESIEIKNFRLFRNAKLTHVPRLCVLVGANGTGKSTLFDVFSFLKDALSMNVGKAIAK
CCCCEEEECCEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGGYREVASRGFAHEPIEFTLQCRLEITGRERLVTYVLKIAPGTGTRVEIERELLRYKRG
CCCHHHHHHCCCCCCCCEEEEEEEEEECCHHHEEHHHEEECCCCCCEEHHHHHHHHHHCC
SYGAPFRFLDFAHGKGYAITNEEEFSKKDEELTREEQELDAPDILAIKGLGQFERFKAAS
CCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH
AFRLMIENWHVSDFHVSEARPSQEEGFAEHLSTRGDNLLLVANFLYENHRDRFDRVLQAM
HHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHH
NRRVPGVSVVQPQQTLDGRLILRFQDGSFKDPFIARYVSDGTVKMFAYLVLLNDPKPYPL
HCCCCCCEEECCHHCCCCEEEEEECCCCCCCCHHHHHHCCCHHEEEEEEEEECCCCCCEE
LAVEEPENQLYPELLPELAEEFRDYARRGGRVFISTHSPDFLNALTLEEIHCLRKEKGFT
EEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCE
TITRASDSENLRALFEAGDLPGYLWKQGLFEGLNREVA
EEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQIESIEIKNFRLFRNAKLTHVPRLCVLVGANGTGKSTLFDVFSFLKDALSMNVGKAIAK
CCCCEEEECCEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGGYREVASRGFAHEPIEFTLQCRLEITGRERLVTYVLKIAPGTGTRVEIERELLRYKRG
CCCHHHHHHCCCCCCCCEEEEEEEEEECCHHHEEHHHEEECCCCCCEEHHHHHHHHHHCC
SYGAPFRFLDFAHGKGYAITNEEEFSKKDEELTREEQELDAPDILAIKGLGQFERFKAAS
CCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH
AFRLMIENWHVSDFHVSEARPSQEEGFAEHLSTRGDNLLLVANFLYENHRDRFDRVLQAM
HHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHH
NRRVPGVSVVQPQQTLDGRLILRFQDGSFKDPFIARYVSDGTVKMFAYLVLLNDPKPYPL
HCCCCCCEEECCHHCCCCEEEEEECCCCCCCCHHHHHHCCCHHEEEEEEEEECCCCCCEE
LAVEEPENQLYPELLPELAEEFRDYARRGGRVFISTHSPDFLNALTLEEIHCLRKEKGFT
EEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCE
TITRASDSENLRALFEAGDLPGYLWKQGLFEGLNREVA
EEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA