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The map label for this gene is yibP [H]

Identifier: 84625980

GI number: 84625980

Start: 4885585

End: 4886820

Strand: Reverse

Name: yibP [H]

Synonym: XOO_4323

Alternate gene names: 84625980

Gene position: 4886820-4885585 (Counterclockwise)

Preceding gene: 84625983

Following gene: 84625979

Centisome position: 98.92

GC content: 66.75

Gene sequence:

>1236_bases
ATGTGGTTGGCAGCATGCGTGCTGGCCTGCACGTTGTTGGGCAGCCTGGGCGCAAGCGCGCAGAGCCAGCGCGAGACCGA
GCGCAAACTGCAGCAGCTGCGCGACGAGCTCAAGACCATCAGCGCCGATCGCCGCGAGCTGGAAGGCAAGCGCGGCACCG
CTGCGCAACAGTTGCGCCAGGCCGACGAGAAAGTGGCCAAGACCGCACGCGCATTGAACGAGACCGAAGCGGCGATGCGT
GCGCAGGCGCAACATCTTTCCACCCTGCAGCAGGAACGCGCGCAGTTGCAGCGTGGCCTGCAAAACCAGCGCGCGCAGCT
GGCGGCGTTGTTGCGCGCTGCCGATCAGGTGGGCCGCAACGCGCCGTTGAAAGTGTTGTTGTCGCAAGACACCGTTGGCG
ATGCCACGCGCATGCTGGCCGACCATCGCTATGTGCAGAATGCGCGCGCGCAGCGTATCCACGCCTTGACCACGCAGCTG
CATGCGCTGACGAAAGTGGAACAGGACATCGCCACCCGGCGCCAGGCGCTGGATGCAGCGCGTGCGCAGCAAAAGGCGCA
GGCCGCGACGTTGCAGAAGGATCGCTCGCAGCAAGCGGCCACCGTCGCGCAACTGGACGATCGCTACAAACAACGCGCCG
AACGCGAAAAGGCGATCGGGCAGGACGCCAAGGCGCTGGAACAGCTGCTCGCCAATCTGCGCGCCGCTGCCGCCAAGGCC
GAGGCCGAACGTCGCGCTGCCGCCAAACGCGCCGCTGCCGAAGCCGCCGCGCAGGCAAGACGCGGCAAAACCGATCGGCC
CGATCGCCCCGGCAAGACACCCCCCAAGGTCGTCGCCAGTGCACCGGCCCCCAAGGTCGGCGGACTCAGCTGGCCGGTGT
CGGGCAATCTGCTGGCGCGCTTCAATGCCACCTTGCCCGATGGCCACACCAGTAAAGGCGTGCTGATCGGTGCACCCAAG
GGCACCACGGTCACCGCAGTGGCCGATGGCACGGTGGTGTTTTCCGACTGGATGACCGGCTACGGCATGATCCTGATCGT
GGACCACGGCAACGGCTACATGAGCCTGTACGCGCACAACGACACCTTGCTGCGCGATGCCGGCGCGTCGATCAAACGCG
GCGAAGCGGTGGCCAAGGTCGGCAGTTCGGGCGGGCAGGGCGTGCCGGCGCTGTACTTCGAATTGCGTCGTAACGGGCAA
CCGGTGGATCCATCGAGCTGGCTGCAACGCCGCTGA

Upstream 100 bases:

>100_bases
ACAATCGCGCACCTGCCTGAAGTCACTGGATCTGTCGTTGCCTCCTTCGCCCGCACCACTGCCGCGCTTGCTGCCCGCTT
CTGTCATCGGGCGTGGACAG

Downstream 100 bases:

>100_bases
GCGCGCCGCGCTGCCCGCAATTCAACGCGGATTTACCGCAGCTTCGCGCATAATCCGGTCAGCTCCGCGCTGCGGGGCGC
CTTATCTCTTTGTCGGAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MWLAACVLACTLLGSLGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQADEKVAKTARALNETEAAMR
AQAQHLSTLQQERAQLQRGLQNQRAQLAALLRAADQVGRNAPLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQL
HALTKVEQDIATRRQALDAARAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
EAERRAAAKRAAAEAAAQARRGKTDRPDRPGKTPPKVVASAPAPKVGGLSWPVSGNLLARFNATLPDGHTSKGVLIGAPK
GTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGASIKRGEAVAKVGSSGGQGVPALYFELRRNGQ
PVDPSSWLQRR

Sequences:

>Translated_411_residues
MWLAACVLACTLLGSLGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQADEKVAKTARALNETEAAMR
AQAQHLSTLQQERAQLQRGLQNQRAQLAALLRAADQVGRNAPLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQL
HALTKVEQDIATRRQALDAARAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
EAERRAAAKRAAAEAAAQARRGKTDRPDRPGKTPPKVVASAPAPKVGGLSWPVSGNLLARFNATLPDGHTSKGVLIGAPK
GTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGASIKRGEAVAKVGSSGGQGVPALYFELRRNGQ
PVDPSSWLQRR
>Mature_411_residues
MWLAACVLACTLLGSLGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQADEKVAKTARALNETEAAMR
AQAQHLSTLQQERAQLQRGLQNQRAQLAALLRAADQVGRNAPLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQL
HALTKVEQDIATRRQALDAARAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
EAERRAAAKRAAAEAAAQARRGKTDRPDRPGKTPPKVVASAPAPKVGGLSWPVSGNLLARFNATLPDGHTSKGVLIGAPK
GTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGASIKRGEAVAKVGSSGGQGVPALYFELRRNGQ
PVDPSSWLQRR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=394, Percent_Identity=34.5177664974619, Blast_Score=183, Evalue=2e-47,
Organism=Escherichia coli, GI1789099, Length=122, Percent_Identity=37.7049180327869, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87082174, Length=139, Percent_Identity=34.5323741007194, Blast_Score=82, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 44351; Mature: 44351

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLAACVLACTLLGSLGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQ
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ADEKVAKTARALNETEAAMRAQAQHLSTLQQERAQLQRGLQNQRAQLAALLRAADQVGRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQLHALTKVEQDIATRRQALDAA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EAERRAAAKRAAAEAAAQARRGKTDRPDRPGKTPPKVVASAPAPKVGGLSWPVSGNLLAR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCEEEE
FNATLPDGHTSKGVLIGAPKGTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHN
EECCCCCCCCCCCEEEECCCCCEEEEEECCCEEEECHHHCCCEEEEEECCCCEEEEEECC
DTLLRDAGASIKRGEAVAKVGSSGGQGVPALYFELRRNGQPVDPSSWLQRR
CHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCC
>Mature Secondary Structure
MWLAACVLACTLLGSLGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQ
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ADEKVAKTARALNETEAAMRAQAQHLSTLQQERAQLQRGLQNQRAQLAALLRAADQVGRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQLHALTKVEQDIATRRQALDAA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EAERRAAAKRAAAEAAAQARRGKTDRPDRPGKTPPKVVASAPAPKVGGLSWPVSGNLLAR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCEEEE
FNATLPDGHTSKGVLIGAPKGTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHN
EECCCCCCCCCCCEEEECCCCCEEEEEECCCEEEECHHHCCCEEEEEECCCCEEEEEECC
DTLLRDAGASIKRGEAVAKVGSSGGQGVPALYFELRRNGQPVDPSSWLQRR
CHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]