| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625983
Identifier: 84625983
GI number: 84625983
Start: 4889747
End: 4890097
Strand: Reverse
Name: 84625983
Synonym: XOO_4326
Alternate gene names: NA
Gene position: 4890097-4889747 (Counterclockwise)
Preceding gene: 84625984
Following gene: 84625980
Centisome position: 98.99
GC content: 62.39
Gene sequence:
>351_bases ATGACACAGCGATTGATGAAGACCGCGCTGATCGGCGCATTTGCCTTGGCGTCGCACAGTGCATTTGCACAGGCGGCATC CGACAAACCGGCCAAGGCGCTCACCTGCGTTGAGGTCACCAGCATGCTTACCGCGAAGGGCTACACCAAGGTGCACGACG TCACGTTCGAACATGGCGTGTGGACGGCAGATGCGCGTAGTGGCCACGGCCAGGACGTGGACGTGCACATCGACTCGGTC ACTGGCCGCGTCTACGGCGACCAGACCACGTCCAAGCTCAGCGAAGCCGATGTGCGCGCAGCGCTCTCCACCGGCGGCTA TGCCGATGTGCACGACCTTAAGAGCGGCTAA
Upstream 100 bases:
>100_bases TAGAAATAACTGAATTTTCGTCGCGGCTGCTTGCATGTTTTTACCTGACGGCGATTTTTTGCCCGCCAGCATGGGCGTAT TTCACTGCAGGAGCATTCTC
Downstream 100 bases:
>100_bases CACTGCGCGAAACACCTGCCATAACTCAGCAACGCAAAGGGACTCCGAGTGGAGGCCCTTTGCATGACAGCTGTTTCTCA GTGCTGGTGCCGAACCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MTQRLMKTALIGAFALASHSAFAQAASDKPAKALTCVEVTSMLTAKGYTKVHDVTFEHGVWTADARSGHGQDVDVHIDSV TGRVYGDQTTSKLSEADVRAALSTGGYADVHDLKSG
Sequences:
>Translated_116_residues MTQRLMKTALIGAFALASHSAFAQAASDKPAKALTCVEVTSMLTAKGYTKVHDVTFEHGVWTADARSGHGQDVDVHIDSV TGRVYGDQTTSKLSEADVRAALSTGGYADVHDLKSG >Mature_115_residues TQRLMKTALIGAFALASHSAFAQAASDKPAKALTCVEVTSMLTAKGYTKVHDVTFEHGVWTADARSGHGQDVDVHIDSVT GRVYGDQTTSKLSEADVRAALSTGGYADVHDLKSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12210; Mature: 12079
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRLMKTALIGAFALASHSAFAQAASDKPAKALTCVEVTSMLTAKGYTKVHDVTFEHGV CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCE WTADARSGHGQDVDVHIDSVTGRVYGDQTTSKLSEADVRAALSTGGYADVHDLKSG EECCCCCCCCCEEEEEEECEECEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TQRLMKTALIGAFALASHSAFAQAASDKPAKALTCVEVTSMLTAKGYTKVHDVTFEHGV CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCE WTADARSGHGQDVDVHIDSVTGRVYGDQTTSKLSEADVRAALSTGGYADVHDLKSG EECCCCCCCCCEEEEEEECEECEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA