Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is ybhH [H]

Identifier: 84625957

GI number: 84625957

Start: 4857634

End: 4858689

Strand: Reverse

Name: ybhH [H]

Synonym: XOO_4300

Alternate gene names: 84625957

Gene position: 4858689-4857634 (Counterclockwise)

Preceding gene: 84625958

Following gene: 84625956

Centisome position: 98.35

GC content: 67.14

Gene sequence:

>1056_bases
ATGTCTGAGCGCGTGCGCGCGATGTGGATGCGCGGCGGCACCTCCAAGGGCGGCTTTTTTCTGGCCGACGAGTTGCCTGC
CGACCCCGCCGCGCGCGATGCGTTTTTGCTGCGCGCCTACGGCTCGCCGGATGTGTGCCAGATCGACGGCATGGGTGGCG
CCGATCCGCTGACATCGAAAACCGCCGTGGTGTCGCGCTCCACACGTGCCGATGCCGACGTGGACTATCTGTTCCTGCAG
GTCGCAGTGAAACAGGCGCAGGTCAGCGATGCGCAGAACTGCGGCAACATGCTGGCCGGCGTGGCCCCGTTCGCGCTGGA
GCGCGGCTTGCTGCCCACACGCATTGGCCAGACCGAAGTGCGCATTTTCATGCGCAACACCGGCACCCTGGCTACCGCCA
CCGTGCAAACACCCGATGGCCAGGTGCGTTATGAGGGCGATGCCCGGATCGATGGCGTGCACGGTACGGCGGCGCCGACC
GCGCTGGCATTTGCCGATATCGCCGGCTCCTCGTGCGGTGCACTGCTGCCCAGCGGGCAGGCGGTAGACACGCTCGACGG
CCTGCAAGTCACGCTGATCGACAACGGCATGCCATGCGTGGTGCTGCGCGCCAGCGATGTCGGCATCAGCGGTTACGAAG
ACCGCGCCACGCTCGATGCCGACGCCGCGCTCACGGCGCGCCTGGAAACGCTGCGTCTGCTCGCCGGCCCGTTGATGCAA
CTGGGCGATGTGCGCGAGGCCACGGTGCCGAAGATGATGCTGGTCGCTGCGCCGCGCGCCGGTGGTGCGATCAGCGTGCG
CTCGTTCATTCCGCACCGCTGCCATGCGTCGATCGGCGTACTGGGTGCGGTCACCGTCGCCACCGCCTGCCTGTTATCCG
GCTCGCCCGCCCATGCGCTGGCGCGGTTACCCGGTGGGCGCACCCTGCAGGTGGAAGTCGAACACCCCAGCGGTGCGAGT
AGCTGCGTGATCGATATTGATGCACGGGGTGCCGTGACGCGTGCGGCAGTGGTGAGCACGGCACGCAAATTGTTCGATGG
TGAACTGTATGGCTGA

Upstream 100 bases:

>100_bases
GAGGCACGCAAGCTGCGCAAGCGCGAGCGCCTGGCAAACGGCGAACTGGGCCTGGATATCTATGCAATGCGCGAACGCCT
GGCCGCCAAGGGCCTGCGTT

Downstream 100 bases:

>100_bases
GTATTCCGATGCATCGCTGACCTGCAGCGACCGCTATCAACGGGTCGGCTCGCTGTATGTGCCATCCGATGCGGCCGTCG
AAACGCGGTGGGCGGCGGTC

Product: FldA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSERVRAMWMRGGTSKGGFFLADELPADPAARDAFLLRAYGSPDVCQIDGMGGADPLTSKTAVVSRSTRADADVDYLFLQ
VAVKQAQVSDAQNCGNMLAGVAPFALERGLLPTRIGQTEVRIFMRNTGTLATATVQTPDGQVRYEGDARIDGVHGTAAPT
ALAFADIAGSSCGALLPSGQAVDTLDGLQVTLIDNGMPCVVLRASDVGISGYEDRATLDADAALTARLETLRLLAGPLMQ
LGDVREATVPKMMLVAAPRAGGAISVRSFIPHRCHASIGVLGAVTVATACLLSGSPAHALARLPGGRTLQVEVEHPSGAS
SCVIDIDARGAVTRAAVVSTARKLFDGELYG

Sequences:

>Translated_351_residues
MSERVRAMWMRGGTSKGGFFLADELPADPAARDAFLLRAYGSPDVCQIDGMGGADPLTSKTAVVSRSTRADADVDYLFLQ
VAVKQAQVSDAQNCGNMLAGVAPFALERGLLPTRIGQTEVRIFMRNTGTLATATVQTPDGQVRYEGDARIDGVHGTAAPT
ALAFADIAGSSCGALLPSGQAVDTLDGLQVTLIDNGMPCVVLRASDVGISGYEDRATLDADAALTARLETLRLLAGPLMQ
LGDVREATVPKMMLVAAPRAGGAISVRSFIPHRCHASIGVLGAVTVATACLLSGSPAHALARLPGGRTLQVEVEHPSGAS
SCVIDIDARGAVTRAAVVSTARKLFDGELYG
>Mature_350_residues
SERVRAMWMRGGTSKGGFFLADELPADPAARDAFLLRAYGSPDVCQIDGMGGADPLTSKTAVVSRSTRADADVDYLFLQV
AVKQAQVSDAQNCGNMLAGVAPFALERGLLPTRIGQTEVRIFMRNTGTLATATVQTPDGQVRYEGDARIDGVHGTAAPTA
LAFADIAGSSCGALLPSGQAVDTLDGLQVTLIDNGMPCVVLRASDVGISGYEDRATLDADAALTARLETLRLLAGPLMQL
GDVREATVPKMMLVAAPRAGGAISVRSFIPHRCHASIGVLGAVTVATACLLSGSPAHALARLPGGRTLQVEVEHPSGASS
CVIDIDARGAVTRAAVVSTARKLFDGELYG

Specific function: Unknown

COG id: COG2828

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yraM [H]

Homologues:

Organism=Escherichia coli, GI1786985, Length=349, Percent_Identity=46.7048710601719, Blast_Score=317, Evalue=1e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007400 [H]

Pfam domain/function: PF04303 PrpF [H]

EC number: NA

Molecular weight: Translated: 36347; Mature: 36216

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERVRAMWMRGGTSKGGFFLADELPADPAARDAFLLRAYGSPDVCQIDGMGGADPLTSK
CCCHHEEHEECCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCC
TAVVSRSTRADADVDYLFLQVAVKQAQVSDAQNCGNMLAGVAPFALERGLLPTRIGQTEV
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
RIFMRNTGTLATATVQTPDGQVRYEGDARIDGVHGTAAPTALAFADIAGSSCGALLPSGQ
EEEEECCCCEEEEEEECCCCCEEECCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCC
AVDTLDGLQVTLIDNGMPCVVLRASDVGISGYEDRATLDADAALTARLETLRLLAGPLMQ
CEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LGDVREATVPKMMLVAAPRAGGAISVRSFIPHRCHASIGVLGAVTVATACLLSGSPAHAL
HCCCCHHHCCEEEEEECCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ARLPGGRTLQVEVEHPSGASSCVIDIDARGAVTRAAVVSTARKLFDGELYG
HHCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SERVRAMWMRGGTSKGGFFLADELPADPAARDAFLLRAYGSPDVCQIDGMGGADPLTSK
CCHHEEHEECCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCC
TAVVSRSTRADADVDYLFLQVAVKQAQVSDAQNCGNMLAGVAPFALERGLLPTRIGQTEV
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
RIFMRNTGTLATATVQTPDGQVRYEGDARIDGVHGTAAPTALAFADIAGSSCGALLPSGQ
EEEEECCCCEEEEEEECCCCCEEECCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCC
AVDTLDGLQVTLIDNGMPCVVLRASDVGISGYEDRATLDADAALTARLETLRLLAGPLMQ
CEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LGDVREATVPKMMLVAAPRAGGAISVRSFIPHRCHASIGVLGAVTVATACLLSGSPAHAL
HCCCCHHHCCEEEEEECCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ARLPGGRTLQVEVEHPSGASSCVIDIDARGAVTRAAVVSTARKLFDGELYG
HHCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]