Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84625956

Identifier: 84625956

GI number: 84625956

Start: 4856815

End: 4857405

Strand: Reverse

Name: 84625956

Synonym: XOO_4299

Alternate gene names: NA

Gene position: 4857405-4856815 (Counterclockwise)

Preceding gene: 84625957

Following gene: 84625955

Centisome position: 98.32

GC content: 62.27

Gene sequence:

>591_bases
ATGATCATCGACTGCCACGGCCACTACACCACCGCGCCCGCCGCGCCCGATGCGTTCCGCAAGGCGCAGATCGCGCATGA
CGACGATGCGCACGCGCCTGCACCGGTGTATCCGCACATCTCCGATGACGCCCTGCGCGAAAGCATCGAGCTGCATCAAT
TGCGTCTGCTGCGCGAGCGCGGCGCGGACATGACGATTTTTTCGCCACGCGCCAGCACCATGGCGCATCACATTGGCGAC
GAAGCGGTGAGCCAGGTGTGGACGCGCCACTGCAACGATCTGATCGCACGTGTGGTGCAGCTGTATCCACAGACCTTTAT
CGGCGTGTGTCAGCTGCCGCAGTCGCCAGGCGTTCCGATCGCGCACTCGATCGCCGAGCTGGAACGCTGCGTCAACCAGC
TCCGATTCGTCGGCTGCAACCTCAATCCCGACCCCTCTGGCGGACACTGGAATGGCGTGCCGCTCAATGATCGTGCCTGG
TATCCGTTTTTCGAAAAGATGGTGGAACTCGACGTGCCGGCGATGGTGCATGTGTCGGGCAGCTGCAACGCCAATTTCCA
TGCCACAGGCGCGCATTATCTGGCTCTCTGA

Upstream 100 bases:

>100_bases
CATACGTCGGCACCTGCAGGTTCCGTGCGCCCGACCGATCCACCTTAGGCAGCGGCAGCCGCCTGCTTGCCGCTTCCACT
GCAATCCAAAGACCATCGCC

Downstream 100 bases:

>100_bases
AAATTTGAGTGGGTAGGATTTCGGGTGGTTTACCACTGACGCGGGGATTGGGATGACGGCCAAGGTGTTTGAAGCGGCGC
TGGGGATCGGCGCGCCGTGG

Product: putative 4-oxalomesaconate hydratase

Products: NA

Alternate protein names: FLDW Protein; LOW QUALITY PROTEIN 4-Oxalomesaconate Hydratase; Aminocarboxymuconate-Semialdehyde Decarboxylase

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MIIDCHGHYTTAPAAPDAFRKAQIAHDDDAHAPAPVYPHISDDALRESIELHQLRLLRERGADMTIFSPRASTMAHHIGD
EAVSQVWTRHCNDLIARVVQLYPQTFIGVCQLPQSPGVPIAHSIAELERCVNQLRFVGCNLNPDPSGGHWNGVPLNDRAW
YPFFEKMVELDVPAMVHVSGSCNANFHATGAHYLAL

Sequences:

>Translated_196_residues
MIIDCHGHYTTAPAAPDAFRKAQIAHDDDAHAPAPVYPHISDDALRESIELHQLRLLRERGADMTIFSPRASTMAHHIGD
EAVSQVWTRHCNDLIARVVQLYPQTFIGVCQLPQSPGVPIAHSIAELERCVNQLRFVGCNLNPDPSGGHWNGVPLNDRAW
YPFFEKMVELDVPAMVHVSGSCNANFHATGAHYLAL
>Mature_196_residues
MIIDCHGHYTTAPAAPDAFRKAQIAHDDDAHAPAPVYPHISDDALRESIELHQLRLLRERGADMTIFSPRASTMAHHIGD
EAVSQVWTRHCNDLIARVVQLYPQTFIGVCQLPQSPGVPIAHSIAELERCVNQLRFVGCNLNPDPSGGHWNGVPLNDRAW
YPFFEKMVELDVPAMVHVSGSCNANFHATGAHYLAL

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21687; Mature: 21687

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIDCHGHYTTAPAAPDAFRKAQIAHDDDAHAPAPVYPHISDDALRESIELHQLRLLRER
CEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GADMTIFSPRASTMAHHIGDEAVSQVWTRHCNDLIARVVQLYPQTFIGVCQLPQSPGVPI
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
AHSIAELERCVNQLRFVGCNLNPDPSGGHWNGVPLNDRAWYPFFEKMVELDVPAMVHVSG
HHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECC
SCNANFHATGAHYLAL
CCCCCEECCCEEEECC
>Mature Secondary Structure
MIIDCHGHYTTAPAAPDAFRKAQIAHDDDAHAPAPVYPHISDDALRESIELHQLRLLRER
CEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GADMTIFSPRASTMAHHIGDEAVSQVWTRHCNDLIARVVQLYPQTFIGVCQLPQSPGVPI
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
AHSIAELERCVNQLRFVGCNLNPDPSGGHWNGVPLNDRAWYPFFEKMVELDVPAMVHVSG
HHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECC
SCNANFHATGAHYLAL
CCCCCEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA