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The map label for this gene is phoD [H]

Identifier: 84625947

GI number: 84625947

Start: 4848363

End: 4849934

Strand: Reverse

Name: phoD [H]

Synonym: XOO_4290

Alternate gene names: 84625947

Gene position: 4849934-4848363 (Counterclockwise)

Preceding gene: 84625948

Following gene: 84625945

Centisome position: 98.17

GC content: 65.97

Gene sequence:

>1572_bases
ATGACTGCCTCCGATCCCGCCCGCCGCCGCATCCTGCAAGGCTTGGGTGCCGGTGTGTTGCTGCCGGCTACCGCCGGCTG
GTCAGCGCGCAGCCTGGCCGCGCCGTCGGGGCGGCCGATCATCACCGACGGGGTGCAAAGCGGCGATGTGCTGGACGGCC
GCGCGATGCTGTGGAGCCGTGCCGATCGCCCGGCGCGGTTGCGGGTGGAATGGGACACCCGCCCAAGCCTGCGTCAGGCG
CGACGCGTGGACGGCACGACAGCGTCGGCAGCGCACGACTTCACCGCACGCGCGGACCTCAGCGGCCTGCCGCGCAATCA
GGACATCTTCTATCGCGTGCGCTTCGAAGATGCAGACAGCGGTGTACTGAGCGCACCCGTCCACGGTCATCTGCGCAGTG
CACCGCAGGCGCGTGGCGATGTGCGCTTTGTCTGGAGCGGCGACACTGTTGGCCAGGGCTTCGGCATCAATCCGGATATC
GGCGGCATGCGCATCTACTCGGCGATGCGCGAGCGAAATCCGGATTTCTTCCTGCACAGCGGCGACACCATCTACGCCGA
CAGCCCGATTCCGGCGGCGCTGACGGTCGAAGACGGCAAGCGCTGGCGCAATCTCACCACCGCAGCCAAGAGCAAGGTGG
CCGAAACGCTGGACGAATTTCGCGGCAACTACCGTTACAACCTGCTCGATGAGCACGTGCGCCGTTTCAACGCAGAAGTG
CCGCAAATCTGGCAATGGGACGACCACGAAACTACCAACAACTGGTCGCCCGGCAAGCAATTGGATGCGCGCTATCACGT
GCGCGACATCGACGTGCTGGCCAAGCGCGCCCGCCAGGCCTTCCTGGAATACGCACCGATGCGCGGCGTGCGTGCCGATG
GCAACGGACGCATCTATCGCAAGATCGCGTACGGCCCGCTGCTGGATGTATTCGTGCTGGACATGCGCAGCTACCGCGGC
GCCAACAGCGACAACCTGCAACCGCAGCCTGGCCCCGATGCCGCGTTTCTCGGCCCGGAGCAATTGGCGTGGCTGCAACG
CGAACTGGCCGGCTCGCGCGCGCAATGGAAAGTGATTGCCGCCGACATGCCGATCGGCCTGCAGGTCCCCGATGGCGAAG
ATGCGAACGGGCGACCGCGCTGGGAAGCCATCGCCAATGGCGACCCTGGTGCGCCGCGTGGCCGCGAGCAGGAAATCGCC
ACGCTGTTGCGCTTCATCAGCCGCGCACGCATCCGCAATACGGTGTGGCTGACGGCCGACGTGCATTACTGCGCGGCCCA
TTATTACCACCCCGATCGCGCCGCGTTTCAGGAGTTCGAACCGTTCTGGGAATTCGTCGGCGGCCCGCTCAATGCCGGCA
GCTTCGGGCCGAATGCACTGGATGCGACGTTCGGCCCGAGCGTGATGTTTCAAAAAGCGCCACCTGCGCCCAACACCTCG
CCGCTGGCCGGTTACCAGTTCTTCGGCGAGGTGGAGATCGATGGCCGCAGCGGCGTGCTTACGGTGACCTTGCGCGACCT
GGATGGCGTGGCCCAGTTTCGTCAGCCGATTCTGCCGCACGCTGCGGGGTAA

Upstream 100 bases:

>100_bases
CGGCCATCGCATTGAAGCCGTCAGGCGTGGAAATGGACATCTAGCGGTAAGACGGCAGCGCTACATCTGCCCGCTGCCGC
AGCTGCCTGAAGGACATGCC

Downstream 100 bases:

>100_bases
CCAGACACAGCGGCAGGCTTACGCGCCCGCCAACGGATAGAACGCCAACGCGGCGCGACACTCCGGTGCAGCCCACCATT
CGTGCAACTGCCACTGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MTASDPARRRILQGLGAGVLLPATAGWSARSLAAPSGRPIITDGVQSGDVLDGRAMLWSRADRPARLRVEWDTRPSLRQA
RRVDGTTASAAHDFTARADLSGLPRNQDIFYRVRFEDADSGVLSAPVHGHLRSAPQARGDVRFVWSGDTVGQGFGINPDI
GGMRIYSAMRERNPDFFLHSGDTIYADSPIPAALTVEDGKRWRNLTTAAKSKVAETLDEFRGNYRYNLLDEHVRRFNAEV
PQIWQWDDHETTNNWSPGKQLDARYHVRDIDVLAKRARQAFLEYAPMRGVRADGNGRIYRKIAYGPLLDVFVLDMRSYRG
ANSDNLQPQPGPDAAFLGPEQLAWLQRELAGSRAQWKVIAADMPIGLQVPDGEDANGRPRWEAIANGDPGAPRGREQEIA
TLLRFISRARIRNTVWLTADVHYCAAHYYHPDRAAFQEFEPFWEFVGGPLNAGSFGPNALDATFGPSVMFQKAPPAPNTS
PLAGYQFFGEVEIDGRSGVLTVTLRDLDGVAQFRQPILPHAAG

Sequences:

>Translated_523_residues
MTASDPARRRILQGLGAGVLLPATAGWSARSLAAPSGRPIITDGVQSGDVLDGRAMLWSRADRPARLRVEWDTRPSLRQA
RRVDGTTASAAHDFTARADLSGLPRNQDIFYRVRFEDADSGVLSAPVHGHLRSAPQARGDVRFVWSGDTVGQGFGINPDI
GGMRIYSAMRERNPDFFLHSGDTIYADSPIPAALTVEDGKRWRNLTTAAKSKVAETLDEFRGNYRYNLLDEHVRRFNAEV
PQIWQWDDHETTNNWSPGKQLDARYHVRDIDVLAKRARQAFLEYAPMRGVRADGNGRIYRKIAYGPLLDVFVLDMRSYRG
ANSDNLQPQPGPDAAFLGPEQLAWLQRELAGSRAQWKVIAADMPIGLQVPDGEDANGRPRWEAIANGDPGAPRGREQEIA
TLLRFISRARIRNTVWLTADVHYCAAHYYHPDRAAFQEFEPFWEFVGGPLNAGSFGPNALDATFGPSVMFQKAPPAPNTS
PLAGYQFFGEVEIDGRSGVLTVTLRDLDGVAQFRQPILPHAAG
>Mature_522_residues
TASDPARRRILQGLGAGVLLPATAGWSARSLAAPSGRPIITDGVQSGDVLDGRAMLWSRADRPARLRVEWDTRPSLRQAR
RVDGTTASAAHDFTARADLSGLPRNQDIFYRVRFEDADSGVLSAPVHGHLRSAPQARGDVRFVWSGDTVGQGFGINPDIG
GMRIYSAMRERNPDFFLHSGDTIYADSPIPAALTVEDGKRWRNLTTAAKSKVAETLDEFRGNYRYNLLDEHVRRFNAEVP
QIWQWDDHETTNNWSPGKQLDARYHVRDIDVLAKRARQAFLEYAPMRGVRADGNGRIYRKIAYGPLLDVFVLDMRSYRGA
NSDNLQPQPGPDAAFLGPEQLAWLQRELAGSRAQWKVIAADMPIGLQVPDGEDANGRPRWEAIANGDPGAPRGREQEIAT
LLRFISRARIRNTVWLTADVHYCAAHYYHPDRAAFQEFEPFWEFVGGPLNAGSFGPNALDATFGPSVMFQKAPPAPNTSP
LAGYQFFGEVEIDGRSGVLTVTLRDLDGVAQFRQPILPHAAG

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 57891; Mature: 57760

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASDPARRRILQGLGAGVLLPATAGWSARSLAAPSGRPIITDGVQSGDVLDGRAMLWSR
CCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEECCHHHHHHC
ADRPARLRVEWDTRPSLRQARRVDGTTASAAHDFTARADLSGLPRNQDIFYRVRFEDADS
CCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
GVLSAPVHGHLRSAPQARGDVRFVWSGDTVGQGFGINPDIGGMRIYSAMRERNPDFFLHS
CEEECCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC
GDTIYADSPIPAALTVEDGKRWRNLTTAAKSKVAETLDEFRGNYRYNLLDEHVRRFNAEV
CCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHCCCC
PQIWQWDDHETTNNWSPGKQLDARYHVRDIDVLAKRARQAFLEYAPMRGVRADGNGRIYR
CCEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEE
KIAYGPLLDVFVLDMRSYRGANSDNLQPQPGPDAAFLGPEQLAWLQRELAGSRAQWKVIA
EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE
ADMPIGLQVPDGEDANGRPRWEAIANGDPGAPRGREQEIATLLRFISRARIRNTVWLTAD
ECCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEC
VHYCAAHYYHPDRAAFQEFEPFWEFVGGPLNAGSFGPNALDATFGPSVMFQKAPPAPNTS
HHHHHHHEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
PLAGYQFFGEVEIDGRSGVLTVTLRDLDGVAQFRQPILPHAAG
CCCCEEEEEEEEECCCCCEEEEEECCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TASDPARRRILQGLGAGVLLPATAGWSARSLAAPSGRPIITDGVQSGDVLDGRAMLWSR
CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEECCHHHHHHC
ADRPARLRVEWDTRPSLRQARRVDGTTASAAHDFTARADLSGLPRNQDIFYRVRFEDADS
CCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
GVLSAPVHGHLRSAPQARGDVRFVWSGDTVGQGFGINPDIGGMRIYSAMRERNPDFFLHS
CEEECCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC
GDTIYADSPIPAALTVEDGKRWRNLTTAAKSKVAETLDEFRGNYRYNLLDEHVRRFNAEV
CCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHCCCC
PQIWQWDDHETTNNWSPGKQLDARYHVRDIDVLAKRARQAFLEYAPMRGVRADGNGRIYR
CCEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEE
KIAYGPLLDVFVLDMRSYRGANSDNLQPQPGPDAAFLGPEQLAWLQRELAGSRAQWKVIA
EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE
ADMPIGLQVPDGEDANGRPRWEAIANGDPGAPRGREQEIATLLRFISRARIRNTVWLTAD
ECCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEC
VHYCAAHYYHPDRAAFQEFEPFWEFVGGPLNAGSFGPNALDATFGPSVMFQKAPPAPNTS
HHHHHHHEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
PLAGYQFFGEVEIDGRSGVLTVTLRDLDGVAQFRQPILPHAAG
CCCCEEEEEEEEECCCCCEEEEEECCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]