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The map label for this gene is phoD [H]

Identifier: 84625948

GI number: 84625948

Start: 4850111

End: 4851739

Strand: Reverse

Name: phoD [H]

Synonym: XOO_4291

Alternate gene names: 84625948

Gene position: 4851739-4850111 (Counterclockwise)

Preceding gene: 84625954

Following gene: 84625947

Centisome position: 98.21

GC content: 68.51

Gene sequence:

>1629_bases
ATGCCTGCGATCGACCCGTCTGCCGCCTCACCCCTGCCCGATTCCGTTGCCAGACTGGCTCCACCGGATCCTAGCCGGCG
GCGCATCCTACTCGCTGGCGCCAGTCTGGCCGCGGCAGGGCTGCTGAGCCCCTTCGCACGCGCTAGCGGTACTGCCGACC
CGTTCACGCTGGGGGTGGCGGCCGGCGATCCGTTGGCCGATGGCTTTGTGATCTGGACGCGGCTGGCACCCCGCCCGCTG
GACCCGGACGGACGCGGTGGACTGCGCGCAGCGGTGCCGGTGCGTTGGCAGGTGGCCAGCGACCCGCAGATGCGCACCAT
CGTGCGCCAGGGCGAGACCGTTGCCAGCCCCGCCTGGGGCCATGCGGTGCACGTGGAGCTGACCGGTCTGGCGGCCGATC
GCCCTTACTGGTACTGCTTTGAGGCACTGGGCGCGCGCAGCCAGATCGGTAGCGCGCGTAGCTTGCCGGCAGCGCATCAG
ATGTCGGACACGGCGCGGTTCGGCTTTGTCTCCTGCTCGCACTGGGAGCTGGGGTATTTCAGCGCGTACCGCCACCTCGC
CGCGGAGCAGCCGGACCTGGTGTTCTTCCTGGGCGATTACATCTACGAGTACAGCAACCACGGCGCAGCGGCGAACAAGG
TCGTACGCCCGCACGGCAGCGGCGAGTGCCTGGATCTGGCTGGCTACCGCAACCGCTACGCCCTCTACCGCACCGACCCG
GACCTGCAAGCGCTGCATGCCGGCAGTGCCTGCGTGGCGACCTGGGACGACCACGAGGTACAGAACGATTACGCCAACCG
CTGGTCGCAGGACCCGTCGATTCCGGTCGACACCTTCCTGGCACGGCGCGCTGCCGCCTATCGCGCCTTTTACGAACATT
TCCCGCTGCGGGCCCGGCATCGCCCGCATGGTGCCGACATGCGCATCTACCGCTCGCTGGATTACGGCCAGCTGGCGCGT
TTCTACGTGCTCGATGGCCGCCAGTACCGCAGCGAGCAACCCTGCCCGCAAGCCAATGGCTGGCGCGGCGGGCATGTGGT
GGCCGACAGTTGCCGCGAGCGTACCGACCCGCGTCGCACCATGCTCGGTTGGGAGCAGGAGCGCTGGCTGCAGGGCGGCT
TCGCACGGTCGCCGGCGCGCTGGAATGTCATTGCGCAGGATCTGCTGGTGGCACCGATGCGCCAATCCGGTCGCGATGGC
GTCGTCGGCCACTGGACCGACGGCTGGGACGGCTACCCGGCCACGCGCGAGCGCATGCTCGCTGCGATTGCGAAGACGCG
CTTGCGCAACCCCGTGTTCTGGGGAGGCGACATCCACTCGTATTGGGTCACCGACCTGAAGGCCGATCCGGCCGACGACG
CGTCGGCAACGCTGGCCACCGAGTTCGTCGGCACCTCGATCACCTCCGACGGCCAGAGCAATGTCGAACTGCACGCGACG
ATGGCAGCCAACCCGCACGTGCACTACGTGGACGGCGAAACGCGCGGCTATGTGTCGGTGACGGTCACGCCGGGCCAGAT
GGAAACGCGGCTGCAAGGCATCTCCGATCGGCGCGACCGCAACGCGACAGTGTCGACGACGAAACGCTTCGTGGTGCAAG
ACGGCAGGCCCGGTGCAGTGGAGGCCTGA

Upstream 100 bases:

>100_bases
CTGTGCATGAATGGATCGGCAGCCAGGCTGCACCATGCGACACAAAACTTACATGAAGCAGCCGCACCATGGTTGCGTCT
GTTTCTCTGCCTTGTTGTCC

Downstream 100 bases:

>100_bases
GCCGCTGCCCCGGCTGCGCACGCCTGCATTGCGCCGAAACTGCCGCCCACAGCACTCCGATCACGGCGCACTGTGTCGGC
CATCGCATTGAAGCCGTCAG

Product: alkaline phosphatase D

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MPAIDPSAASPLPDSVARLAPPDPSRRRILLAGASLAAAGLLSPFARASGTADPFTLGVAAGDPLADGFVIWTRLAPRPL
DPDGRGGLRAAVPVRWQVASDPQMRTIVRQGETVASPAWGHAVHVELTGLAADRPYWYCFEALGARSQIGSARSLPAAHQ
MSDTARFGFVSCSHWELGYFSAYRHLAAEQPDLVFFLGDYIYEYSNHGAAANKVVRPHGSGECLDLAGYRNRYALYRTDP
DLQALHAGSACVATWDDHEVQNDYANRWSQDPSIPVDTFLARRAAAYRAFYEHFPLRARHRPHGADMRIYRSLDYGQLAR
FYVLDGRQYRSEQPCPQANGWRGGHVVADSCRERTDPRRTMLGWEQERWLQGGFARSPARWNVIAQDLLVAPMRQSGRDG
VVGHWTDGWDGYPATRERMLAAIAKTRLRNPVFWGGDIHSYWVTDLKADPADDASATLATEFVGTSITSDGQSNVELHAT
MAANPHVHYVDGETRGYVSVTVTPGQMETRLQGISDRRDRNATVSTTKRFVVQDGRPGAVEA

Sequences:

>Translated_542_residues
MPAIDPSAASPLPDSVARLAPPDPSRRRILLAGASLAAAGLLSPFARASGTADPFTLGVAAGDPLADGFVIWTRLAPRPL
DPDGRGGLRAAVPVRWQVASDPQMRTIVRQGETVASPAWGHAVHVELTGLAADRPYWYCFEALGARSQIGSARSLPAAHQ
MSDTARFGFVSCSHWELGYFSAYRHLAAEQPDLVFFLGDYIYEYSNHGAAANKVVRPHGSGECLDLAGYRNRYALYRTDP
DLQALHAGSACVATWDDHEVQNDYANRWSQDPSIPVDTFLARRAAAYRAFYEHFPLRARHRPHGADMRIYRSLDYGQLAR
FYVLDGRQYRSEQPCPQANGWRGGHVVADSCRERTDPRRTMLGWEQERWLQGGFARSPARWNVIAQDLLVAPMRQSGRDG
VVGHWTDGWDGYPATRERMLAAIAKTRLRNPVFWGGDIHSYWVTDLKADPADDASATLATEFVGTSITSDGQSNVELHAT
MAANPHVHYVDGETRGYVSVTVTPGQMETRLQGISDRRDRNATVSTTKRFVVQDGRPGAVEA
>Mature_541_residues
PAIDPSAASPLPDSVARLAPPDPSRRRILLAGASLAAAGLLSPFARASGTADPFTLGVAAGDPLADGFVIWTRLAPRPLD
PDGRGGLRAAVPVRWQVASDPQMRTIVRQGETVASPAWGHAVHVELTGLAADRPYWYCFEALGARSQIGSARSLPAAHQM
SDTARFGFVSCSHWELGYFSAYRHLAAEQPDLVFFLGDYIYEYSNHGAAANKVVRPHGSGECLDLAGYRNRYALYRTDPD
LQALHAGSACVATWDDHEVQNDYANRWSQDPSIPVDTFLARRAAAYRAFYEHFPLRARHRPHGADMRIYRSLDYGQLARF
YVLDGRQYRSEQPCPQANGWRGGHVVADSCRERTDPRRTMLGWEQERWLQGGFARSPARWNVIAQDLLVAPMRQSGRDGV
VGHWTDGWDGYPATRERMLAAIAKTRLRNPVFWGGDIHSYWVTDLKADPADDASATLATEFVGTSITSDGQSNVELHATM
AANPHVHYVDGETRGYVSVTVTPGQMETRLQGISDRRDRNATVSTTKRFVVQDGRPGAVEA

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 59724; Mature: 59593

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAIDPSAASPLPDSVARLAPPDPSRRRILLAGASLAAAGLLSPFARASGTADPFTLGVA
CCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEE
AGDPLADGFVIWTRLAPRPLDPDGRGGLRAAVPVRWQVASDPQMRTIVRQGETVASPAWG
CCCCCCCCEEEEEECCCCCCCCCCCCCCEEECEEEEEECCCCHHHHHHHCCCCCCCCCCC
HAVHVELTGLAADRPYWYCFEALGARSQIGSARSLPAAHQMSDTARFGFVSCSHWELGYF
CEEEEEEEEEECCCCHHHHHHHHCCHHHCCCCCCCCCHHHHCCCHHCCEEEECCCCCHHH
SAYRHLAAEQPDLVFFLGDYIYEYSNHGAAANKVVRPHGSGECLDLAGYRNRYALYRTDP
HHHHHHHCCCCCEEEEEHHHHHHHCCCCCHHCCEECCCCCCCEEEECCCCCCEEEEECCC
DLQALHAGSACVATWDDHEVQNDYANRWSQDPSIPVDTFLARRAAAYRAFYEHFPLRARH
CHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
RPHGADMRIYRSLDYGQLARFYVLDGRQYRSEQPCPQANGWRGGHVVADSCRERTDPRRT
CCCCCCEEEEECCCHHHEEEEEEECCHHHCCCCCCCCCCCCCCCCEEHHHHHHCCCCHHH
MLGWEQERWLQGGFARSPARWNVIAQDLLVAPMRQSGRDGVVGHWTDGWDGYPATRERML
HCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHH
AAIAKTRLRNPVFWGGDIHSYWVTDLKADPADDASATLATEFVGTSITSDGQSNVELHAT
HHHHHHHHCCCEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEE
MAANPHVHYVDGETRGYVSVTVTPGQMETRLQGISDRRDRNATVSTTKRFVVQDGRPGAV
EECCCEEEEECCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCEEECCEEEEEECCCCCCC
EA
CC
>Mature Secondary Structure 
PAIDPSAASPLPDSVARLAPPDPSRRRILLAGASLAAAGLLSPFARASGTADPFTLGVA
CCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEE
AGDPLADGFVIWTRLAPRPLDPDGRGGLRAAVPVRWQVASDPQMRTIVRQGETVASPAWG
CCCCCCCCEEEEEECCCCCCCCCCCCCCEEECEEEEEECCCCHHHHHHHCCCCCCCCCCC
HAVHVELTGLAADRPYWYCFEALGARSQIGSARSLPAAHQMSDTARFGFVSCSHWELGYF
CEEEEEEEEEECCCCHHHHHHHHCCHHHCCCCCCCCCHHHHCCCHHCCEEEECCCCCHHH
SAYRHLAAEQPDLVFFLGDYIYEYSNHGAAANKVVRPHGSGECLDLAGYRNRYALYRTDP
HHHHHHHCCCCCEEEEEHHHHHHHCCCCCHHCCEECCCCCCCEEEECCCCCCEEEEECCC
DLQALHAGSACVATWDDHEVQNDYANRWSQDPSIPVDTFLARRAAAYRAFYEHFPLRARH
CHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
RPHGADMRIYRSLDYGQLARFYVLDGRQYRSEQPCPQANGWRGGHVVADSCRERTDPRRT
CCCCCCEEEEECCCHHHEEEEEEECCHHHCCCCCCCCCCCCCCCCEEHHHHHHCCCCHHH
MLGWEQERWLQGGFARSPARWNVIAQDLLVAPMRQSGRDGVVGHWTDGWDGYPATRERML
HCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHH
AAIAKTRLRNPVFWGGDIHSYWVTDLKADPADDASATLATEFVGTSITSDGQSNVELHAT
HHHHHHHHCCCEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEE
MAANPHVHYVDGETRGYVSVTVTPGQMETRLQGISDRRDRNATVSTTKRFVVQDGRPGAV
EECCCEEEEECCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCEEECCEEEEEECCCCCCC
EA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]